SMTL ID : 8cxa.1

Crystal Structure of 3-oxoacyl-[acyl-carrier-protein] reductase from Mycobacterium smegmatis with bound NAD

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-tetramer

Ligands

2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 27 residues within 4Å: Chain A: G.34, A.36, Q.37, G.38, I.39, D.58, I.59, V.83, D.84, V.85, N.111, A.112, A.113, I.114, F.115, S.116, V.137, I.164, S.165, S.166, Y.179, K.183, P.209, H.210, G.211, I.212, I.216 27 PLIP interactions: 27 interactions with chain A Hydrophobic interactions: A:I.114, A:V.137 Hydrogen bonds: A:G.34, A:A.36, A:Q.37, A:Q.37, A:I.39, A:I.59, A:V.83, A:V.85, A:N.111, A:A.113, A:S.116, A:S.116, A:S.116, A:Y.179, A:K.183, A:H.210, A:G.211, A:I.212 Water bridges: A:G.40, A:G.40, A:T.117, A:H.210, A:R.218, A:R.218, A:R.218 NAD.2: 27 residues within 4Å: Chain B: G.34, A.36, Q.37, G.38, I.39, D.58, I.59, V.83, D.84, V.85, N.111, A.112, A.113, F.115, S.116, V.137, I.164, S.165, S.166, Y.179, K.183, P.209, H.210, G.211, I.212, I.216, R.218 24 PLIP interactions: 24 interactions with chain B Hydrophobic interactions: B:V.137 Hydrogen bonds: B:G.34, B:A.36, B:Q.37, B:Q.37, B:I.39, B:D.84, B:D.84, B:V.85, B:N.111, B:A.113, B:S.116, B:S.116, B:S.116, B:Y.179, B:K.183, B:H.210, B:G.211, B:I.212 Water bridges: B:G.40, B:S.167, B:T.214, B:R.218, B:R.218

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bolejack, M.J. et al., Crystal Structure of 3-oxoacyl-[acyl-carrier-protein] reductase with bound NAD. to be published

Release Date

2022-07-27

Peptides

3-oxoacyl-[acyl-carrier-protein] reductase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

3-oxoacyl-[acyl-carrier-protein] reductase