SMTL ID : 8cz9.1

Crystal Structure of the E372K LNK SH2 Domain mutant in Complex with a JAK2 pY813 Phosphopeptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

1 x PRO- ASP- PTR- GLU- LEU- LEU- THR- GLU: JAK2 pY813 phosphopeptide(Non-covalent)

PRO-ASP-PTR-GLU-LEU-LEU-THR-GLU.1: 17 residues within 4Å: Chain A: R.16, R.37, S.39, E.40, S.41, V.47, K.57, H.58, L.59, R.60, V.71, Q.72, H.73, I.91, P.92, L.93, E.94 22 PLIP interactions: 22 interactions with chain A Hydrophobic interactions: A:V.47, A:H.58, A:R.60, A:V.71, A:I.91 Hydrogen bonds: A:R.16, A:R.16, A:S.39, A:E.40, A:S.41, A:H.58, A:Q.72, A:Q.72, A:P.92, A:P.92, A:E.94 Water bridges: A:H.58 Salt bridges: A:R.16, A:R.37, A:K.57, A:H.73 pi-Cation interactions: A:R.16

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: H.75, F.76, P.77 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Y. et al., Rare SH2B3 coding variants in lupus patients impair B cell tolerance and predispose to autoimmunity. J.Exp.Med. (2024)

Release Date

2023-05-31

Peptides

SH2B adapter protein 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

SH2B adapter protein 3