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SMTL ID : 8d1u.1
E. coli beta-ketoacyl-[acyl carrier protein] synthase III (FabH) with an acetylated cysteine and in complex with oxa(dethia)-Coenzyme A
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 1.30 Å
Oligo State
homo-dimer
Ligands
2 x
UT7
:
oxa(dethia)-CoA
(Non-covalent)
UT7.1:
23 residues within 4Å:
Chain A:
D.30
,
T.31
,
W.35
,
R.39
,
T.40
,
C.115
,
R.154
,
G.155
,
I.158
,
I.159
,
L.192
,
M.210
,
G.212
,
N.213
,
V.215
,
F.216
,
H.247
,
A.249
,
N.250
,
R.252
,
I.253
,
N.277
,
F.307
23
PLIP interactions
:
23 interactions with chain A
Hydrophobic interactions:
A:T.40
,
A:V.215
Hydrogen bonds:
A:T.31
,
A:R.154
,
A:R.154
,
A:G.212
,
A:G.212
,
A:H.247
,
A:N.250
,
A:N.277
Water bridges:
A:R.39
,
A:R.39
,
A:R.154
,
A:N.213
,
A:N.213
,
A:R.252
Salt bridges:
A:R.39
,
A:R.39
,
A:R.252
pi-Stacking:
A:W.35
,
A:W.35
,
A:W.35
pi-Cation interactions:
A:R.154
UT7.3:
23 residues within 4Å:
Chain B:
D.30
,
T.31
,
W.35
,
R.39
,
T.40
,
C.115
,
R.154
,
G.155
,
I.158
,
I.159
,
L.192
,
M.210
,
G.212
,
N.213
,
V.215
,
F.216
,
H.247
,
A.249
,
N.250
,
R.252
,
I.253
,
N.277
,
F.307
23
PLIP interactions
:
23 interactions with chain B
Hydrophobic interactions:
B:T.40
,
B:V.215
Hydrogen bonds:
B:T.31
,
B:R.154
,
B:R.154
,
B:G.212
,
B:G.212
,
B:H.247
,
B:N.250
,
B:N.277
Water bridges:
B:R.39
,
B:R.39
,
B:R.154
,
B:N.213
,
B:N.213
,
B:R.252
Salt bridges:
B:R.39
,
B:R.39
,
B:R.252
pi-Stacking:
B:W.35
,
B:W.35
,
B:W.35
pi-Cation interactions:
B:R.154
2 x
CL
:
CHLORIDE ION
(Non-functional Binders)
CL.2:
3 residues within 4Å:
Chain A:
S.205
,
H.207
,
T.209
Ligand excluded by PLIP
CL.4:
3 residues within 4Å:
Chain B:
S.205
,
H.207
,
T.209
Ligand excluded by PLIP
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Benjamin, A.B. et al., Structures of chloramphenicol acetyltransferase III and Escherichia coli beta-ketoacylsynthase III co-crystallized with partially hydrolysed acetyl-oxa(dethia)CoA. Acta Crystallogr.,Sect.F (2023)
Release Date
2022-06-15
Peptides
3-oxoacyl-[acyl-carrier-protein] synthase 3:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
A
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3-oxoacyl-[acyl-carrier-protein] synthase 3
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