SMTL ID : 8d5q.1

TCR TG6 in complex with Ld-HF10

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain B: E.165, V.166, H.167, S.168 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:H.167, B:S.168 SO4.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.2: 5 residues within 4Å: Chain B: N.7, P.8, R.9, W.10, R.11 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.7 Salt bridges: B:R.11

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, Y. et al., Peptide Centric V beta Specific Germline Contacts Shape a Specialist T Cell Response. Front Immunol (2022)

Release Date

2022-09-14

Peptides

TCR-alpha: A
TCR-beta: B
H-2 class I histocompatibility antigen, L-D alpha chain: C
Dense granule protein 6, HF10 peptide: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
E

TCR-alpha

TCR-beta

H-2 class I histocompatibility antigen, L-D alpha chain

Dense granule protein 6, HF10 peptide

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