SMTL ID : 8d64.1

ELIC with cysteamine in POPC nanodisc

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-pentamer

Ligands

5 x DHL: 2-AMINO-ETHANETHIOL(Non-covalent)

DHL.1: 9 residues within 4Å: Chain A: E.67, I.69, E.121, P.122, F.123, Y.165, L.168, F.178 Chain E: Y.28 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.67, A:P.122, A:Y.165 DHL.2: 9 residues within 4Å: Chain A: Y.28 Chain B: E.67, I.69, E.121, P.122, F.123, Y.165, L.168, F.178 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:E.67, B:P.122, B:Y.165 DHL.3: 9 residues within 4Å: Chain B: Y.28 Chain C: E.67, I.69, E.121, P.122, F.123, Y.165, L.168, F.178 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:E.67, C:P.122, C:Y.165 DHL.4: 9 residues within 4Å: Chain C: Y.28 Chain D: E.67, I.69, E.121, P.122, F.123, Y.165, L.168, F.178 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:E.67, D:P.122, D:Y.165 DHL.5: 9 residues within 4Å: Chain D: Y.28 Chain E: E.67, I.69, E.121, P.122, F.123, Y.165, L.168, F.178 3 PLIP interactions: 3 interactions with chain E Hydrogen bonds: E:E.67, E:P.122, E:Y.165

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Petroff II, J.T. et al., Open-channel structure of a pentameric ligand-gated ion channel reveals a mechanism of leaflet-specific phospholipid modulation. Nat Commun (2022)

Release Date

2022-11-23

Peptides

Erwinia ligand-gated ion channel: ABCDE

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

Membrane

We predict this structure to be a membrane protein.
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Erwinia ligand-gated ion channel

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