SMTL ID : 8d7h.1

Cryo-EM structure of human CLCF1 in complex with CRLF1 and CNTFR alpha

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-2-mer

Ligands

14 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 4 residues within 4Å: Chain A: R.88, E.89, H.167, N.168 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 2 residues within 4Å: Chain A: W.29, N.48 No protein-ligand interaction detected (PLIP) NAG-NAG.3: 3 residues within 4Å: Chain A: N.38, G.60, S.62 No protein-ligand interaction detected (PLIP) NAG-NAG.4: 1 residues within 4Å: Chain A: N.120 No protein-ligand interaction detected (PLIP) NAG-NAG.5: 3 residues within 4Å: Chain C: T.22, N.55, T.58 No protein-ligand interaction detected (PLIP) NAG-NAG.6: 2 residues within 4Å: Chain C: N.65, N.67 No protein-ligand interaction detected (PLIP) NAG-NAG.7: 2 residues within 4Å: Chain C: N.103, T.119 No protein-ligand interaction detected (PLIP) NAG-NAG.8: 4 residues within 4Å: Chain D: R.88, E.89, H.167, N.168 No protein-ligand interaction detected (PLIP) NAG-NAG.9: 2 residues within 4Å: Chain D: W.29, N.48 No protein-ligand interaction detected (PLIP) NAG-NAG.10: 3 residues within 4Å: Chain D: N.38, G.60, S.62 No protein-ligand interaction detected (PLIP) NAG-NAG.11: 1 residues within 4Å: Chain D: N.120 No protein-ligand interaction detected (PLIP) NAG-NAG.12: 3 residues within 4Å: Chain F: T.22, N.55, T.58 No protein-ligand interaction detected (PLIP) NAG-NAG.13: 2 residues within 4Å: Chain F: N.65, N.67 No protein-ligand interaction detected (PLIP) NAG-NAG.14: 2 residues within 4Å: Chain F: N.103, T.119 No protein-ligand interaction detected (PLIP)

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.15: 1 residues within 4Å: Chain C: N.131 No protein-ligand interaction detected (PLIP) NAG.16: 1 residues within 4Å: Chain C: N.255 No protein-ligand interaction detected (PLIP) NAG.17: 1 residues within 4Å: Chain F: N.131 No protein-ligand interaction detected (PLIP) NAG.18: 1 residues within 4Å: Chain F: N.255 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhou, Y. et al., Structural insights into the assembly of gp130 family cytokine signaling complexes. Sci Adv (2023)

Release Date

2023-03-29

Peptides

Ciliary neurotrophic factor receptor subunit alpha: AD
Cardiotrophin-like cytokine factor 1: BE
Cytokine receptor-like factor 1: CF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

D
G

B
D

E
H

C
A

F
E

Ciliary neurotrophic factor receptor subunit alpha

Cardiotrophin-like cytokine factor 1

Cytokine receptor-like factor 1

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