SMTL ID : 8d8k.1

Yeast mitochondrial small subunit assembly intermediate (State 2)

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
1 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
72 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)
1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Harper, N.J. et al., Principles of mitoribosomal small subunit assembly in eukaryotes. Nature (2023)
Release Date
2022-12-21
Peptides
Probable S-adenosyl-L-methionine-dependent RNA methyltransferase RSM22, mitochondrial: A
37S ribosomal protein MRP13, mitochondrial: B
Ribosomal protein VAR1, mitochondrial: C
Mitochondrial group I intron splicing factor CCM1: D
37S ribosomal protein SWS2, mitochondrial: E
37S ribosomal protein MRP2, mitochondrial: F
37S ribosomal protein S28, mitochondrial: G
37S ribosomal protein S16, mitochondrial: H
37S ribosomal protein S17, mitochondrial: I
37S ribosomal protein RSM18, mitochondrial: J
37S ribosomal protein S19, mitochondrial: K
37S ribosomal protein MRP21, mitochondrial: L
37S ribosomal protein S25, mitochondrial: M
37S ribosomal protein PET123, mitochondrial: N
37S ribosomal protein S23, mitochondrial: O
Mitochondrial 37S ribosomal protein S27: P
37S ribosomal protein S24, mitochondrial: Q
37S ribosomal protein MRP10, mitochondrial: R
37S ribosomal protein MRP51, mitochondrial: S
37S ribosomal protein MRP4, mitochondrial: T
Protein FYV4, mitochondrial: U
37S ribosomal protein S26, mitochondrial: V
37S ribosomal protein NAM9, mitochondrial: W
37S ribosomal protein MRP1, mitochondrial: X
37S ribosomal protein S5, mitochondrial: Y
37S ribosomal protein MRP17, mitochondrial: Z
37S ribosomal protein S35, mitochondrial: 0
37S ribosomal protein S7, mitochondrial: 1
37S ribosomal protein S8, mitochondrial: 2
37S ribosomal protein S9, mitochondrial: 3
37S ribosomal protein S10, mitochondrial: 5
37S ribosomal protein S18, mitochondrial: 6
unknown protein sequence: 7
MRPS12 isoform 1: 8
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
0
B
5
C
C
D
d
E
M
F
N
G
O
H
P
I
Q
J
R
K
S
L
T
M
U
N
V
O
W
P
X
Q
Y
R
Z
S
A
T
B
U
2
V
3
W
D
X
4
Y
E
Z
F
0
6
1
G
2
H
3
I
5
J
6
K
7
c
8
L

Probable S-adenosyl-L-methionine-dependent RNA methyltransferase RSM22, mitochondrial

37S ribosomal protein MRP13, mitochondrial

Ribosomal protein VAR1, mitochondrial

Mitochondrial group I intron splicing factor CCM1

37S ribosomal protein SWS2, mitochondrial

37S ribosomal protein MRP2, mitochondrial

37S ribosomal protein S28, mitochondrial

37S ribosomal protein S16, mitochondrial

37S ribosomal protein S17, mitochondrial

37S ribosomal protein RSM18, mitochondrial

37S ribosomal protein S19, mitochondrial

37S ribosomal protein MRP21, mitochondrial

37S ribosomal protein S25, mitochondrial

37S ribosomal protein PET123, mitochondrial

37S ribosomal protein S23, mitochondrial

Mitochondrial 37S ribosomal protein S27

37S ribosomal protein S24, mitochondrial

37S ribosomal protein MRP10, mitochondrial

37S ribosomal protein MRP51, mitochondrial

37S ribosomal protein MRP4, mitochondrial

Protein FYV4, mitochondrial

37S ribosomal protein S26, mitochondrial

37S ribosomal protein NAM9, mitochondrial

37S ribosomal protein MRP1, mitochondrial

37S ribosomal protein S5, mitochondrial

37S ribosomal protein MRP17, mitochondrial

37S ribosomal protein S35, mitochondrial

37S ribosomal protein S7, mitochondrial

37S ribosomal protein S8, mitochondrial

37S ribosomal protein S9, mitochondrial

37S ribosomal protein S10, mitochondrial

37S ribosomal protein S18, mitochondrial

unknown protein sequence

MRPS12 isoform 1

Related Entries With Identical Sequence

5mrc.40 | 5mrc.42 | 5mrc.43 | 5mrc.53 | 5mrc.56 | 5mrc.69 | 5mrc.70 | 5mrc.74 | 5mre.40 | 5mre.42 | 5mre.43 | 5mre.53 | 5mre.56 | 5mre.69 | 5mre.70 | 5mre.74 | 5mrf.40 | 5mrf.42 | 5mrf.43 | 5mrf.53 | 5mrf.56 | 5mrf.69 | 5mrf.70 | 5mrf.74 | 8d8j.1 | 8d8l.1 | 8om2.1 | 8om3.1 | 8om4.1