SMTL ID : 8d95.1

Scaffold Hopping via Ring Opening Enables Identification of Acyclic Compounds as New Complement Factor D Inhibitors

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.17 Å

Oligo State

monomer

Ligands

1 x QIE: N-(6-bromopyridin-2-yl)-1-[(3-cyanophenyl)acetyl]-L-prolinamide(Non-covalent)

QIE.1: 15 residues within 4Å: Chain A: H.24, L.25, C.26, H.41, C.42, W.128, G.129, K.180, G.181, S.183, T.198, S.199, G.200, S.201, R.202 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:K.180, A:R.202 Hydrogen bonds: A:L.25, A:G.181, A:S.183, A:R.202 Halogen bonds: A:W.128

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, W. et al., Scaffold hopping via ring opening enables identification of acyclic compounds as new complement Factor D inhibitors. Bioorg.Med.Chem. (2022)

Release Date

2022-11-02

Peptides

Complement factor D: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Complement factor D

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