SMTL ID : 8da3.1

Coevolved affibody-Z domain pair LL1.c1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.06 Å

Oligo State

hetero-1-1-mer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: K.8, E.9, N.12 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.9, A:N.12

2 x MLI: MALONATE ION(Non-functional Binders)

MLI.2: 3 residues within 4Å: Chain A: K.5 Chain B: F.33, S.34 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:S.34 MLI.3: 3 residues within 4Å: Chain B: N.24, Q.27, Q.56 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.24

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, A. et al., Deploying synthetic coevolution and machine learning to engineer protein-protein interactions. Science (2023)

Release Date

2023-07-26

Peptides

Immunoglobulin G-binding protein A: A
Affibody LL1.FILF: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Immunoglobulin G-binding protein A

Affibody LL1.FILF