SMTL ID : 8dbf.1

Human PRPS1 with ADP; Filament Interface

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-12-mer

Ligands

12 x HSX: 5-O-phosphono-alpha-D-ribofuranose(Non-covalent)

HSX.1: 12 residues within 4Å: Chain A: H.130, D.171, D.220, D.221, M.222, D.224, T.225, C.226, G.227, T.228 Ligands: ADP.3, MG.5 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:D.220, A:D.224, A:T.225, A:T.225, A:C.226, A:T.228, A:T.228 Salt bridges: A:H.130 HSX.7: 12 residues within 4Å: Chain B: H.130, D.171, D.220, D.221, M.222, D.224, T.225, C.226, G.227, T.228 Ligands: ADP.6, MG.10 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:H.130, B:D.220, B:D.224, B:T.225, B:C.226, B:T.228, B:T.228, B:T.228 Salt bridges: B:H.130 HSX.11: 12 residues within 4Å: Chain C: H.130, D.171, D.220, D.221, M.222, D.224, T.225, C.226, G.227, T.228 Ligands: ADP.13, MG.15 8 PLIP interactions: 8 interactions with chain C Hydrogen bonds: C:D.220, C:D.224, C:T.225, C:T.225, C:C.226, C:T.228, C:T.228 Salt bridges: C:H.130 HSX.16: 12 residues within 4Å: Chain D: H.130, D.171, D.220, D.221, M.222, D.224, T.225, C.226, G.227, T.228 Ligands: ADP.18, MG.20 9 PLIP interactions: 9 interactions with chain D Hydrogen bonds: D:H.130, D:D.220, D:D.224, D:T.225, D:C.226, D:T.228, D:T.228, D:T.228 Salt bridges: D:H.130 HSX.21: 12 residues within 4Å: Chain E: H.130, D.171, D.220, D.221, M.222, D.224, T.225, C.226, G.227, T.228 Ligands: ADP.23, MG.25 8 PLIP interactions: 8 interactions with chain E Hydrogen bonds: E:D.220, E:D.224, E:T.225, E:T.225, E:C.226, E:T.228, E:T.228 Salt bridges: E:H.130 HSX.27: 12 residues within 4Å: Chain F: H.130, D.171, D.220, D.221, M.222, D.224, T.225, C.226, G.227, T.228 Ligands: ADP.26, MG.30 9 PLIP interactions: 9 interactions with chain F Hydrogen bonds: F:H.130, F:D.220, F:D.224, F:T.225, F:C.226, F:T.228, F:T.228, F:T.228 Salt bridges: F:H.130 HSX.31: 12 residues within 4Å: Chain G: H.130, D.171, D.220, D.221, M.222, D.224, T.225, C.226, G.227, T.228 Ligands: ADP.33, MG.35 8 PLIP interactions: 8 interactions with chain G Hydrogen bonds: G:D.220, G:D.224, G:T.225, G:T.225, G:C.226, G:T.228, G:T.228 Salt bridges: G:H.130 HSX.37: 12 residues within 4Å: Chain H: H.130, D.171, D.220, D.221, M.222, D.224, T.225, C.226, G.227, T.228 Ligands: ADP.36, MG.40 9 PLIP interactions: 9 interactions with chain H Hydrogen bonds: H:H.130, H:D.220, H:D.224, H:T.225, H:C.226, H:T.228, H:T.228, H:T.228 Salt bridges: H:H.130 HSX.41: 12 residues within 4Å: Chain I: H.130, D.171, D.220, D.221, M.222, D.224, T.225, C.226, G.227, T.228 Ligands: ADP.43, MG.45 8 PLIP interactions: 8 interactions with chain I Hydrogen bonds: I:D.220, I:D.224, I:T.225, I:T.225, I:C.226, I:T.228, I:T.228 Salt bridges: I:H.130 HSX.46: 12 residues within 4Å: Chain J: H.130, D.171, D.220, D.221, M.222, D.224, T.225, C.226, G.227, T.228 Ligands: ADP.48, MG.50 9 PLIP interactions: 9 interactions with chain J Hydrogen bonds: J:H.130, J:D.220, J:D.224, J:T.225, J:C.226, J:T.228, J:T.228, J:T.228 Salt bridges: J:H.130 HSX.51: 12 residues within 4Å: Chain K: H.130, D.171, D.220, D.221, M.222, D.224, T.225, C.226, G.227, T.228 Ligands: ADP.53, MG.55 8 PLIP interactions: 8 interactions with chain K Hydrogen bonds: K:D.220, K:D.224, K:T.225, K:T.225, K:C.226, K:T.228, K:T.228 Salt bridges: K:H.130 HSX.57: 12 residues within 4Å: Chain L: H.130, D.171, D.220, D.221, M.222, D.224, T.225, C.226, G.227, T.228 Ligands: ADP.56, MG.60 9 PLIP interactions: 9 interactions with chain L Hydrogen bonds: L:H.130, L:D.220, L:D.224, L:T.225, L:C.226, L:T.228, L:T.228, L:T.228 Salt bridges: L:H.130

24 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.2: 16 residues within 4Å: Chain A: Q.135, V.142, D.143, N.144, Y.146, S.308, V.309, S.310, F.313 Chain E: R.49, A.80 Chain F: K.100, D.101, K.102, S.103, R.104 19 PLIP interactions: 10 interactions with chain A, 3 interactions with chain E, 6 interactions with chain F Hydrogen bonds: A:Q.135, A:D.143, A:D.143, A:N.144, A:N.144, A:S.308, A:V.309, A:S.310, F:R.104 pi-Stacking: A:F.313, A:F.313 Water bridges: E:I.79, F:K.100, F:R.104, F:R.104 Salt bridges: E:R.49, E:R.49, F:K.100, F:R.104 ADP.3: 13 residues within 4Å: Chain A: R.96, Q.97, K.99, D.101, K.102, H.130, D.224 Chain B: F.35, N.37, E.39 Chain F: K.176 Ligands: HSX.1, MG.4 13 PLIP interactions: 8 interactions with chain A, 1 interactions with chain F, 4 interactions with chain B Hydrogen bonds: A:D.101, A:D.224, B:N.37, B:N.37 Water bridges: A:K.99, A:K.99, A:K.99 Salt bridges: A:K.99, A:K.99, A:H.130, F:K.176 pi-Stacking: B:F.35, B:F.35 ADP.6: 13 residues within 4Å: Chain A: F.35, N.37, E.39 Chain B: R.96, Q.97, K.99, D.101, K.102, H.130, D.224 Chain C: K.176 Ligands: HSX.7, MG.9 12 PLIP interactions: 4 interactions with chain A, 1 interactions with chain C, 7 interactions with chain B Hydrogen bonds: A:N.37, A:N.37 pi-Stacking: A:F.35, A:F.35 Salt bridges: C:K.176, B:K.99, B:K.99, B:H.130 Water bridges: B:K.99, B:K.99, B:K.99, B:H.130 ADP.8: 16 residues within 4Å: Chain B: Q.135, V.142, D.143, N.144, Y.146, S.308, V.309, S.310, F.313 Chain C: K.100, D.101, K.102, S.103, R.104 Chain D: R.49, A.80 20 PLIP interactions: 10 interactions with chain B, 6 interactions with chain C, 4 interactions with chain D Hydrogen bonds: B:Q.135, B:D.143, B:N.144, B:N.144, B:S.308, B:V.309, B:S.310, C:R.104, D:A.80 Water bridges: B:Y.146, C:K.100, C:R.104, C:R.104, D:I.79 pi-Stacking: B:F.313, B:F.313 Salt bridges: C:K.100, C:R.104, D:R.49, D:R.49 ADP.12: 16 residues within 4Å: Chain A: R.49, A.80 Chain B: K.100, D.101, K.102, S.103, R.104 Chain C: Q.135, V.142, D.143, N.144, Y.146, S.308, V.309, S.310, F.313 19 PLIP interactions: 10 interactions with chain C, 3 interactions with chain A, 6 interactions with chain B Hydrogen bonds: C:Q.135, C:D.143, C:D.143, C:N.144, C:N.144, C:S.308, C:V.309, C:S.310, B:R.104 pi-Stacking: C:F.313, C:F.313 Water bridges: A:I.79, B:K.100, B:R.104, B:R.104 Salt bridges: A:R.49, A:R.49, B:K.100, B:R.104 ADP.13: 13 residues within 4Å: Chain B: K.176 Chain C: R.96, Q.97, K.99, D.101, K.102, H.130, D.224 Chain D: F.35, N.37, E.39 Ligands: HSX.11, MG.14 13 PLIP interactions: 4 interactions with chain D, 8 interactions with chain C, 1 interactions with chain B Hydrogen bonds: D:N.37, D:N.37, C:D.101, C:D.224 pi-Stacking: D:F.35, D:F.35 Water bridges: C:K.99, C:K.99, C:K.99 Salt bridges: C:K.99, C:K.99, C:H.130, B:K.176 ADP.17: 16 residues within 4Å: Chain D: Q.135, V.142, D.143, N.144, Y.146, S.308, V.309, S.310, F.313 Chain E: K.100, D.101, K.102, S.103, R.104 Chain F: R.49, A.80 20 PLIP interactions: 10 interactions with chain D, 6 interactions with chain E, 4 interactions with chain F Hydrogen bonds: D:Q.135, D:D.143, D:N.144, D:N.144, D:S.308, D:V.309, D:S.310, E:R.104, F:A.80 Water bridges: D:Y.146, E:K.100, E:R.104, E:R.104, F:I.79 pi-Stacking: D:F.313, D:F.313 Salt bridges: E:K.100, E:R.104, F:R.49, F:R.49 ADP.18: 13 residues within 4Å: Chain C: F.35, N.37, E.39 Chain D: R.96, Q.97, K.99, D.101, K.102, H.130, D.224 Chain E: K.176 Ligands: HSX.16, MG.19 12 PLIP interactions: 4 interactions with chain C, 7 interactions with chain D, 1 interactions with chain E Hydrogen bonds: C:N.37, C:N.37 pi-Stacking: C:F.35, C:F.35 Water bridges: D:K.99, D:K.99, D:K.99, D:H.130 Salt bridges: D:K.99, D:K.99, D:H.130, E:K.176 ADP.22: 16 residues within 4Å: Chain C: R.49, A.80 Chain D: K.100, D.101, K.102, S.103, R.104 Chain E: Q.135, V.142, D.143, N.144, Y.146, S.308, V.309, S.310, F.313 19 PLIP interactions: 10 interactions with chain E, 3 interactions with chain C, 6 interactions with chain D Hydrogen bonds: E:Q.135, E:D.143, E:D.143, E:N.144, E:N.144, E:S.308, E:V.309, E:S.310, D:R.104 pi-Stacking: E:F.313, E:F.313 Water bridges: C:I.79, D:K.100, D:R.104, D:R.104 Salt bridges: C:R.49, C:R.49, D:K.100, D:R.104 ADP.23: 13 residues within 4Å: Chain D: K.176 Chain E: R.96, Q.97, K.99, D.101, K.102, H.130, D.224 Chain F: F.35, N.37, E.39 Ligands: HSX.21, MG.24 13 PLIP interactions: 4 interactions with chain F, 8 interactions with chain E, 1 interactions with chain D Hydrogen bonds: F:N.37, F:N.37, E:D.101, E:D.224 pi-Stacking: F:F.35, F:F.35 Water bridges: E:K.99, E:K.99, E:K.99 Salt bridges: E:K.99, E:K.99, E:H.130, D:K.176 ADP.26: 13 residues within 4Å: Chain A: K.176 Chain E: F.35, N.37, E.39 Chain F: R.96, Q.97, K.99, D.101, K.102, H.130, D.224 Ligands: HSX.27, MG.29 12 PLIP interactions: 1 interactions with chain A, 7 interactions with chain F, 4 interactions with chain E Salt bridges: A:K.176, F:K.99, F:K.99, F:H.130 Water bridges: F:K.99, F:K.99, F:K.99, F:H.130 Hydrogen bonds: E:N.37, E:N.37 pi-Stacking: E:F.35, E:F.35 ADP.28: 16 residues within 4Å: Chain A: K.100, D.101, K.102, S.103, R.104 Chain B: R.49, A.80 Chain F: Q.135, V.142, D.143, N.144, Y.146, S.308, V.309, S.310, F.313 20 PLIP interactions: 6 interactions with chain A, 4 interactions with chain B, 10 interactions with chain F Hydrogen bonds: A:R.104, B:A.80, F:Q.135, F:D.143, F:N.144, F:N.144, F:S.308, F:V.309, F:S.310 Water bridges: A:K.100, A:R.104, A:R.104, B:I.79, F:Y.146 Salt bridges: A:K.100, A:R.104, B:R.49, B:R.49 pi-Stacking: F:F.313, F:F.313 ADP.32: 16 residues within 4Å: Chain G: Q.135, V.142, D.143, N.144, Y.146, S.308, V.309, S.310, F.313 Chain K: R.49, A.80 Chain L: K.100, D.101, K.102, S.103, R.104 19 PLIP interactions: 10 interactions with chain G, 3 interactions with chain K, 6 interactions with chain L Hydrogen bonds: G:Q.135, G:D.143, G:D.143, G:N.144, G:N.144, G:S.308, G:V.309, G:S.310, L:R.104 pi-Stacking: G:F.313, G:F.313 Water bridges: K:I.79, L:K.100, L:R.104, L:R.104 Salt bridges: K:R.49, K:R.49, L:K.100, L:R.104 ADP.33: 13 residues within 4Å: Chain G: R.96, Q.97, K.99, D.101, K.102, H.130, D.224 Chain H: F.35, N.37, E.39 Chain L: K.176 Ligands: HSX.31, MG.34 13 PLIP interactions: 8 interactions with chain G, 1 interactions with chain L, 4 interactions with chain H Hydrogen bonds: G:D.101, G:D.224, H:N.37, H:N.37 Water bridges: G:K.99, G:K.99, G:K.99 Salt bridges: G:K.99, G:K.99, G:H.130, L:K.176 pi-Stacking: H:F.35, H:F.35 ADP.36: 13 residues within 4Å: Chain G: F.35, N.37, E.39 Chain H: R.96, Q.97, K.99, D.101, K.102, H.130, D.224 Chain I: K.176 Ligands: HSX.37, MG.39 12 PLIP interactions: 4 interactions with chain G, 7 interactions with chain H, 1 interactions with chain I Hydrogen bonds: G:N.37, G:N.37 pi-Stacking: G:F.35, G:F.35 Water bridges: H:K.99, H:K.99, H:K.99, H:H.130 Salt bridges: H:K.99, H:K.99, H:H.130, I:K.176 ADP.38: 16 residues within 4Å: Chain H: Q.135, V.142, D.143, N.144, Y.146, S.308, V.309, S.310, F.313 Chain I: K.100, D.101, K.102, S.103, R.104 Chain J: R.49, A.80 20 PLIP interactions: 10 interactions with chain H, 4 interactions with chain J, 6 interactions with chain I Hydrogen bonds: H:Q.135, H:D.143, H:N.144, H:N.144, H:S.308, H:V.309, H:S.310, J:A.80, I:R.104 Water bridges: H:Y.146, J:I.79, I:K.100, I:R.104, I:R.104 pi-Stacking: H:F.313, H:F.313 Salt bridges: J:R.49, J:R.49, I:K.100, I:R.104 ADP.42: 16 residues within 4Å: Chain G: R.49, A.80 Chain H: K.100, D.101, K.102, S.103, R.104 Chain I: Q.135, V.142, D.143, N.144, Y.146, S.308, V.309, S.310, F.313 19 PLIP interactions: 6 interactions with chain H, 10 interactions with chain I, 3 interactions with chain G Hydrogen bonds: H:R.104, I:Q.135, I:D.143, I:D.143, I:N.144, I:N.144, I:S.308, I:V.309, I:S.310 Water bridges: H:K.100, H:R.104, H:R.104, G:I.79 Salt bridges: H:K.100, H:R.104, G:R.49, G:R.49 pi-Stacking: I:F.313, I:F.313 ADP.43: 13 residues within 4Å: Chain H: K.176 Chain I: R.96, Q.97, K.99, D.101, K.102, H.130, D.224 Chain J: F.35, N.37, E.39 Ligands: HSX.41, MG.44 13 PLIP interactions: 1 interactions with chain H, 8 interactions with chain I, 4 interactions with chain J Salt bridges: H:K.176, I:K.99, I:K.99, I:H.130 Hydrogen bonds: I:D.101, I:D.224, J:N.37, J:N.37 Water bridges: I:K.99, I:K.99, I:K.99 pi-Stacking: J:F.35, J:F.35 ADP.47: 16 residues within 4Å: Chain J: Q.135, V.142, D.143, N.144, Y.146, S.308, V.309, S.310, F.313 Chain K: K.100, D.101, K.102, S.103, R.104 Chain L: R.49, A.80 20 PLIP interactions: 10 interactions with chain J, 4 interactions with chain L, 6 interactions with chain K Hydrogen bonds: J:Q.135, J:D.143, J:N.144, J:N.144, J:S.308, J:V.309, J:S.310, L:A.80, K:R.104 Water bridges: J:Y.146, L:I.79, K:K.100, K:R.104, K:R.104 pi-Stacking: J:F.313, J:F.313 Salt bridges: L:R.49, L:R.49, K:K.100, K:R.104 ADP.48: 13 residues within 4Å: Chain I: F.35, N.37, E.39 Chain J: R.96, Q.97, K.99, D.101, K.102, H.130, D.224 Chain K: K.176 Ligands: HSX.46, MG.49 12 PLIP interactions: 4 interactions with chain I, 7 interactions with chain J, 1 interactions with chain K Hydrogen bonds: I:N.37, I:N.37 pi-Stacking: I:F.35, I:F.35 Water bridges: J:K.99, J:K.99, J:K.99, J:H.130 Salt bridges: J:K.99, J:K.99, J:H.130, K:K.176 ADP.52: 16 residues within 4Å: Chain I: R.49, A.80 Chain J: K.100, D.101, K.102, S.103, R.104 Chain K: Q.135, V.142, D.143, N.144, Y.146, S.308, V.309, S.310, F.313 19 PLIP interactions: 6 interactions with chain J, 10 interactions with chain K, 3 interactions with chain I Hydrogen bonds: J:R.104, K:Q.135, K:D.143, K:D.143, K:N.144, K:N.144, K:S.308, K:V.309, K:S.310 Water bridges: J:K.100, J:R.104, J:R.104, I:I.79 Salt bridges: J:K.100, J:R.104, I:R.49, I:R.49 pi-Stacking: K:F.313, K:F.313 ADP.53: 13 residues within 4Å: Chain J: K.176 Chain K: R.96, Q.97, K.99, D.101, K.102, H.130, D.224 Chain L: F.35, N.37, E.39 Ligands: HSX.51, MG.54 13 PLIP interactions: 8 interactions with chain K, 4 interactions with chain L, 1 interactions with chain J Hydrogen bonds: K:D.101, K:D.224, L:N.37, L:N.37 Water bridges: K:K.99, K:K.99, K:K.99 Salt bridges: K:K.99, K:K.99, K:H.130, J:K.176 pi-Stacking: L:F.35, L:F.35 ADP.56: 13 residues within 4Å: Chain G: K.176 Chain K: F.35, N.37, E.39 Chain L: R.96, Q.97, K.99, D.101, K.102, H.130, D.224 Ligands: HSX.57, MG.59 12 PLIP interactions: 1 interactions with chain G, 4 interactions with chain K, 7 interactions with chain L Salt bridges: G:K.176, L:K.99, L:K.99, L:H.130 Hydrogen bonds: K:N.37, K:N.37 pi-Stacking: K:F.35, K:F.35 Water bridges: L:K.99, L:K.99, L:K.99, L:H.130 ADP.58: 16 residues within 4Å: Chain G: K.100, D.101, K.102, S.103, R.104 Chain H: R.49, A.80 Chain L: Q.135, V.142, D.143, N.144, Y.146, S.308, V.309, S.310, F.313 20 PLIP interactions: 4 interactions with chain H, 10 interactions with chain L, 6 interactions with chain G Hydrogen bonds: H:A.80, L:Q.135, L:D.143, L:N.144, L:N.144, L:S.308, L:V.309, L:S.310, G:R.104 Water bridges: H:I.79, L:Y.146, G:K.100, G:R.104, G:R.104 Salt bridges: H:R.49, H:R.49, G:K.100, G:R.104 pi-Stacking: L:F.313, L:F.313

24 x MG: MAGNESIUM ION(Non-covalent)

MG.4: 3 residues within 4Å: Chain A: K.99, H.130 Ligands: ADP.3 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:H.130, H2O.1, H2O.1, H2O.1 MG.5: 2 residues within 4Å: Chain A: D.171 Ligands: HSX.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.171 MG.9: 3 residues within 4Å: Chain B: K.99, H.130 Ligands: ADP.6 4 PLIP interactions: 1 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:H.130, H2O.1, H2O.1, H2O.1 MG.10: 2 residues within 4Å: Chain B: D.171 Ligands: HSX.7 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:D.171 MG.14: 3 residues within 4Å: Chain C: K.99, H.130 Ligands: ADP.13 4 PLIP interactions: 1 interactions with chain C, 3 Ligand-Water interactions Metal complexes: C:H.130, H2O.1, H2O.1, H2O.1 MG.15: 2 residues within 4Å: Chain C: D.171 Ligands: HSX.11 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:D.171 MG.19: 3 residues within 4Å: Chain D: K.99, H.130 Ligands: ADP.18 4 PLIP interactions: 1 interactions with chain D, 3 Ligand-Water interactions Metal complexes: D:H.130, H2O.1, H2O.2, H2O.2 MG.20: 2 residues within 4Å: Chain D: D.171 Ligands: HSX.16 1 PLIP interactions: 1 interactions with chain D Metal complexes: D:D.171 MG.24: 3 residues within 4Å: Chain E: K.99, H.130 Ligands: ADP.23 4 PLIP interactions: 1 interactions with chain E, 3 Ligand-Water interactions Metal complexes: E:H.130, H2O.2, H2O.2, H2O.2 MG.25: 2 residues within 4Å: Chain E: D.171 Ligands: HSX.21 1 PLIP interactions: 1 interactions with chain E Metal complexes: E:D.171 MG.29: 3 residues within 4Å: Chain F: K.99, H.130 Ligands: ADP.26 4 PLIP interactions: 1 interactions with chain F, 3 Ligand-Water interactions Metal complexes: F:H.130, H2O.2, H2O.2, H2O.2 MG.30: 2 residues within 4Å: Chain F: D.171 Ligands: HSX.27 1 PLIP interactions: 1 interactions with chain F Metal complexes: F:D.171 MG.34: 3 residues within 4Å: Chain G: K.99, H.130 Ligands: ADP.33 4 PLIP interactions: 1 interactions with chain G, 3 Ligand-Water interactions Metal complexes: G:H.130, H2O.2, H2O.2, H2O.2 MG.35: 2 residues within 4Å: Chain G: D.171 Ligands: HSX.31 1 PLIP interactions: 1 interactions with chain G Metal complexes: G:D.171 MG.39: 3 residues within 4Å: Chain H: K.99, H.130 Ligands: ADP.36 4 PLIP interactions: 1 interactions with chain H, 3 Ligand-Water interactions Metal complexes: H:H.130, H2O.2, H2O.2, H2O.3 MG.40: 2 residues within 4Å: Chain H: D.171 Ligands: HSX.37 1 PLIP interactions: 1 interactions with chain H Metal complexes: H:D.171 MG.44: 3 residues within 4Å: Chain I: K.99, H.130 Ligands: ADP.43 4 PLIP interactions: 1 interactions with chain I, 3 Ligand-Water interactions Metal complexes: I:H.130, H2O.3, H2O.3, H2O.3 MG.45: 2 residues within 4Å: Chain I: D.171 Ligands: HSX.41 1 PLIP interactions: 1 interactions with chain I Metal complexes: I:D.171 MG.49: 3 residues within 4Å: Chain J: K.99, H.130 Ligands: ADP.48 4 PLIP interactions: 1 interactions with chain J, 3 Ligand-Water interactions Metal complexes: J:H.130, H2O.3, H2O.3, H2O.3 MG.50: 2 residues within 4Å: Chain J: D.171 Ligands: HSX.46 1 PLIP interactions: 1 interactions with chain J Metal complexes: J:D.171 MG.54: 3 residues within 4Å: Chain K: K.99, H.130 Ligands: ADP.53 4 PLIP interactions: 1 interactions with chain K, 3 Ligand-Water interactions Metal complexes: K:H.130, H2O.3, H2O.3, H2O.4 MG.55: 2 residues within 4Å: Chain K: D.171 Ligands: HSX.51 1 PLIP interactions: 1 interactions with chain K Metal complexes: K:D.171 MG.59: 3 residues within 4Å: Chain L: K.99, H.130 Ligands: ADP.56 4 PLIP interactions: 1 interactions with chain L, 3 Ligand-Water interactions Metal complexes: L:H.130, H2O.3, H2O.3, H2O.4 MG.60: 2 residues within 4Å: Chain L: D.171 Ligands: HSX.57 1 PLIP interactions: 1 interactions with chain L Metal complexes: L:D.171

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hvorecny, K.L. et al., Human PRPS1 filaments stabilize allosteric sites to regulate activity. Nat.Struct.Mol.Biol. (2023)

Release Date

2023-02-15

Peptides

Ribose-phosphate pyrophosphokinase 1: ABCDEFGHIJKL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
I

J
J

K
K

L
L

Ribose-phosphate pyrophosphokinase 1

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