SMTL ID : 8dc4.2 (3 other biounits)

Crystal structure of p53 Y220C covalently bound to carbazole KG3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.87, H.90, C.149, C.153 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.87, A:H.90, A:C.149, A:C.153

1 x R3R: 9-propanoyl-9H-carbazole-3-carbaldehyde, bound form(Covalent)

R3R.2: 13 residues within 4Å: Chain A: L.56, W.57, V.58, S.60, T.61, P.62, C.131, E.132, P.133, P.134, D.139, S.140, T.141 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:V.58, A:P.134 Hydrogen bonds: A:T.61

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guiley, K.Z. et al., A Small Molecule Reacts with the p53 Somatic Mutant Y220C to Rescue Wild-type Thermal Stability. Cancer Discov (2023)

Release Date

2022-10-12

Peptides

Cellular tumor antigen p53: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cellular tumor antigen p53

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