SMTL ID : 8de2.1 (3 other biounits)

TEM-1 beta-lactamase A237Y mutant covalently bound to avibactam, a room temperature structure

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.45 Å

Oligo State

monomer

Ligands

1 x NXL: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide(Covalent)

NXL.1: 14 residues within 4Å: Chain A: M.45, S.46, K.49, Y.81, S.106, N.108, E.142, N.146, V.192, K.210, S.211, G.212, Y.213, R.219 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:Y.81, A:Y.213 Hydrogen bonds: A:S.46, A:S.106, A:N.108, A:S.211, A:Y.213, A:Y.213, A:Y.213 Water bridges: A:K.49, A:K.49, A:S.211, A:S.211, A:S.211, A:R.219 Salt bridges: A:K.210, A:R.219

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ji, Z. et al., Protein Electric Fields Enable Faster and Longer-Lasting Covalent Inhibition of beta-Lactamases. J.Am.Chem.Soc. (2022)

Release Date

2022-09-07

Peptides

Beta-lactamase TEM: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-lactamase TEM

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