SMTL ID : 8dpz.1

Local refinement of SARS-CoV-2 vaccine induced antibody DH1338 bound to SARS-CoV-2 HexaPro RBD Spike ectodomain

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 4 residues within 4Å: Chain A: F.13, G.14, N.18, L.43 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stalls, V. et al., Local refinement of SARS-CoV-2 vaccine induced antibody Ab026500 bound to SARS-CoV-2 HexaPro RBD Spike ectodomain. To Be Published

Release Date

2023-08-02

Peptides

Spike protein S1: A
DH1338 Fab Heavy Chain: B
DH1338 Fab Light Chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
F

C
G

Spike protein S1

DH1338 Fab Heavy Chain

DH1338 Fab Light Chain

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