SMTL ID : 8ds3.1

LRRC8A:C conformation 1 (round)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-5-1-mer

Ligands

21 x PEE: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine(Non-covalent)

PEE.1: 13 residues within 4Å: Chain A: E.207, N.208, W.212, K.215, Y.216, Y.219, L.222 Chain F: M.37, F.41, K.318, L.319 Ligands: PEE.7, PEE.20 Ligand excluded by PLIP PEE.2: 3 residues within 4Å: Chain A: S.415, I.422, F.423 Ligand excluded by PLIP PEE.3: 3 residues within 4Å: Chain A: I.412, S.415 Ligands: PEE.4 Ligand excluded by PLIP PEE.4: 17 residues within 4Å: Chain A: M.37, F.41, T.408, I.412, L.413, F.416 Chain B: E.207, N.208, L.210, W.212, K.215, Y.216, Y.219, L.220, L.222 Ligands: PEE.3, PEE.7 Ligand excluded by PLIP PEE.5: 2 residues within 4Å: Chain B: S.415, I.422 Ligand excluded by PLIP PEE.6: 3 residues within 4Å: Chain B: I.412, F.416 Ligands: PEE.8 Ligand excluded by PLIP PEE.7: 23 residues within 4Å: Chain A: A.39, F.41, G.43, T.44, T.48, Q.49, Y.219, L.222 Chain B: G.43, T.44, Q.46, V.47, T.48, Q.49, D.50, L.222 Chain F: F.41, T.44, M.48 Ligands: PEE.1, PEE.4, PEE.14, PEE.21 Ligand excluded by PLIP PEE.8: 15 residues within 4Å: Chain B: M.37, F.41, I.412 Chain C: E.207, N.208, L.210, H.211, W.212, K.215, Y.216, Y.219, L.220, L.222 Ligands: PEE.6, PEE.14 Ligand excluded by PLIP PEE.9: 2 residues within 4Å: Chain C: V.378, S.415 Ligand excluded by PLIP PEE.10: 5 residues within 4Å: Chain C: I.412, S.415, F.416, S.419 Ligands: PEE.11 Ligand excluded by PLIP PEE.11: 16 residues within 4Å: Chain C: M.37, F.41, T.408, I.412, L.413, F.416 Chain D: E.207, N.208, L.210, W.212, K.215, Y.216, L.220, L.222 Ligands: PEE.10, PEE.14 Ligand excluded by PLIP PEE.12: 4 residues within 4Å: Chain D: S.415, S.419, I.422, F.423 Ligand excluded by PLIP PEE.13: 2 residues within 4Å: Chain D: I.412 Ligands: PEE.15 Ligand excluded by PLIP PEE.14: 24 residues within 4Å: Chain B: F.41, T.44, T.48 Chain C: A.39, F.41, G.43, T.44, V.47, T.48, Q.49, Y.219, L.222 Chain D: G.43, T.44, V.47, T.48, D.50, K.51, Y.219, L.222 Ligands: PEE.7, PEE.8, PEE.11, PEE.21 Ligand excluded by PLIP PEE.15: 16 residues within 4Å: Chain D: M.37, F.41, T.408, I.412, L.413, F.416 Chain E: E.207, N.208, L.210, W.212, K.215, Y.216, Y.219, L.222 Ligands: PEE.13, PEE.21 Ligand excluded by PLIP PEE.16: 3 residues within 4Å: Chain E: V.378, S.415, I.422 Ligand excluded by PLIP PEE.17: 3 residues within 4Å: Chain E: I.412, F.416 Ligands: PEE.18 Ligand excluded by PLIP PEE.18: 15 residues within 4Å: Chain E: M.37, F.41, I.412, L.413, F.416 Chain F: E.117, L.120, H.121, W.122, K.125, Y.126, Y.129, I.275 Ligands: PEE.17, PEE.21 Ligand excluded by PLIP PEE.19: 3 residues within 4Å: Chain F: S.281, L.324, S.328 Ligand excluded by PLIP PEE.20: 3 residues within 4Å: Chain F: K.318, F.321 Ligands: PEE.1 Ligand excluded by PLIP PEE.21: 19 residues within 4Å: Chain A: V.47, T.48 Chain D: T.44, T.48, Q.49 Chain E: V.47, T.48, L.222 Chain F: C.43, T.44, V.47, M.48, Q.49, D.50, L.132 Ligands: PEE.7, PEE.14, PEE.15, PEE.18 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kern, D.M. et al., Structural basis for assembly and lipid-mediated gating of LRRC8A:C volume-regulated anion channels. Nat.Struct.Mol.Biol. (2023)

Release Date

2023-03-08

Peptides

Volume-regulated anion channel subunit LRRC8A,Soluble cytochrome b562: ABCDE
Volume-regulated anion channel subunit LRRC8C: F

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

Membrane

We predict this structure to be a membrane protein.
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Volume-regulated anion channel subunit LRRC8A,Soluble cytochrome b562

Volume-regulated anion channel subunit LRRC8C

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