SMTL ID : 8e05.1

Structure of dimeric LRRK1

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

2 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 14 residues within 4Å: Chain A: P.647, P.648, R.649, Q.650, G.651, K.652, S.653, T.654, T.758, H.759, D.761, I.805, S.806, C.807 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:P.647, A:R.649, A:Q.650, A:G.651, A:S.653, A:S.653, A:H.759, A:C.807 Salt bridges: A:R.649, A:K.652, A:D.761 pi-Stacking: A:H.759, A:H.759 GDP.2: 15 residues within 4Å: Chain B: P.647, P.648, R.649, Q.650, G.651, K.652, S.653, T.654, T.758, H.759, D.761, L.762, I.805, S.806, C.807 14 PLIP interactions: 14 interactions with chain B Hydrogen bonds: B:P.647, B:R.649, B:Q.650, B:G.651, B:S.653, B:S.653, B:H.759, B:C.807 Salt bridges: B:R.649, B:K.652, B:D.761 pi-Stacking: B:H.759, B:H.759 pi-Cation interactions: B:H.759

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Reimer, J.M. et al., Structure of LRRK1 and mechanisms of autoinhibition and activation. Nat.Struct.Mol.Biol. (2023)

Release Date

2023-08-30

Peptides

Leucine-rich repeat serine/threonine-protein kinase 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Leucine-rich repeat serine/threonine-protein kinase 1

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