SMTL ID : 8e14.1

Cryo-EM structure of Rous sarcoma virus strand transfer complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-octamer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.9, H.13, C.37, C.40 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.9, A:H.13, A:C.37, A:C.40 ZN.2: 4 residues within 4Å: Chain E: H.9, H.13, C.37, C.40 4 PLIP interactions: 4 interactions with chain E Metal complexes: E:H.9, E:H.13, E:C.37, E:C.40

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bera, S. et al., Molecular determinants for Rous sarcoma virus intasome assemblies involved in retroviral integration. J.Biol.Chem. (2023)

Release Date

2023-04-26

Peptides

integrase: ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

integrase

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