SMTL ID : 8e1g.2 (1 other biounit)

SARS-CoV-2 RBD in complex with Omicron-neutralizing antibody 2A10

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.57 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 5 residues within 4Å: Chain C: F.20, G.21, F.24, N.25, L.50 3 PLIP interactions: 3 interactions with chain C Hydrophobic interactions: C:F.20, C:F.24, C:L.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hastie, K.M. et al., Potent Omicron-neutralizing antibodies isolated from a patient vaccinated 6 months before Omicron emergence. Cell Rep (2023)

Release Date

2023-06-28

Peptides

2A10 Fab, heavy chain: A
2A10 Fab, light chain: B
Spike protein S1: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
V

B
T

C
B

2A10 Fab, heavy chain

2A10 Fab, light chain

Spike protein S1

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