SMTL ID : 8e1x.1

FGFR2 kinase domain in complex with a Pyrazolo[1,5-a]pyrimidine analog (Compound 29)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.68 Å

Oligo State

homo-dimer

Ligands

2 x U9P: (5M)-N-methyl-5-{(6M,8S)-5-{[(3S)-oxolan-3-yl]amino}-6-[1-(propan-2-yl)-1H-pyrazol-3-yl]pyrazolo[1,5-a]pyrimidin-3-yl}pyridine-3-carboxamide(Non-covalent)

U9P.1: 16 residues within 4Å: Chain A: K.47, L.49, E.51, F.54, V.57, K.79, E.127, Y.128, A.129, S.130, G.132, N.133, R.192, L.195, D.206, N.224 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:Y.128, A:L.195 Hydrogen bonds: A:L.49, A:A.129, A:N.133, A:R.192 U9P.2: 16 residues within 4Å: Chain B: L.49, E.51, F.54, A.77, K.79, I.110, V.126, E.127, Y.128, A.129, S.130, G.132, N.133, R.192, L.195, D.206 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:L.49, B:L.195 Hydrogen bonds: B:A.129, B:N.133, B:R.192

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shvartsbart, A. et al., Discovery of Potent and Selective Inhibitors of Wild-Type and Gatekeeper Mutant Fibroblast Growth Factor Receptor (FGFR) 2/3. J.Med.Chem. (2022)

Release Date

2022-11-23

Peptides

Fibroblast growth factor receptor 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Fibroblast growth factor receptor 2