SMTL ID : 8e2m.1

Bruton's tyrosine kinase (BTK) with compound 13

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x UB6: (5P)-5-[4-methyl-6-(2-methylpropyl)pyridin-3-yl]-4-oxo-N-[(1R,2S)-2-propanamidocyclopentyl]-4,5-dihydro-3H-1-thia-3,5,8-triazaacenaphthylene-2-carboxamide(Covalent)

UB6.1: 25 residues within 4Å: Chain A: L.20, G.21, T.22, G.23, V.28, A.40, I.41, K.42, M.61, V.70, L.72, I.84, T.86, E.87, Y.88, M.89, G.92, C.93, N.96, R.137, L.140, S.150, D.151, F.152, L.154 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:V.28, A:K.42, A:T.86, A:T.86, A:F.152, A:F.152, A:L.154 Hydrogen bonds: A:K.42, A:M.89, A:N.96, A:D.151 Water bridges: A:K.42, A:S.150 pi-Cation interactions: A:K.42

1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.2: 4 residues within 4Å: Chain A: W.33, Y.37, M.62, Y.73 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.73, A:Y.73

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tichenor, M.S. et al., Discovery of JNJ-64264681: A Potent and Selective Covalent Inhibitor of Bruton's Tyrosine Kinase. J.Med.Chem. (2022)

Release Date

2022-11-16

Peptides

Tyrosine-protein kinase BTK: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein kinase BTK

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