SMTL ID : 8e4c.1

IgM BCR fab truncated form

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-1-1-mer

Ligands

5 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 1 residues within 4Å: Chain C: N.66 No protein-ligand interaction detected (PLIP) NAG.2: 2 residues within 4Å: Chain B: L.314 Chain C: N.76 No protein-ligand interaction detected (PLIP) NAG.3: 2 residues within 4Å: Chain D: W.47, N.68 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:N.68 NAG.4: 1 residues within 4Å: Chain D: N.99 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:N.99 NAG.5: 3 residues within 4Å: Chain D: N.128, H.129, N.130 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dong, Y. et al., Structural principles of B cell antigen receptor assembly. Nature (2022)

Release Date

2022-11-16

Peptides

Isoform 2 of Immunoglobulin heavy constant mu: AB
B-cell antigen receptor complex-associated protein alpha chain,Yellow fluorescent protein: C
B-cell antigen receptor complex-associated protein beta chain: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

C
C

D
D

Membrane

We predict this structure to be a membrane protein.
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Isoform 2 of Immunoglobulin heavy constant mu

B-cell antigen receptor complex-associated protein alpha chain,Yellow fluorescent protein

B-cell antigen receptor complex-associated protein beta chain

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