SMTL ID : 8e7z.1 (1 other biounit)

RsTSPO mutant -A138F

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-tetramer

Ligands

20 x OLC: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(Non-covalent)

OLC.1: 10 residues within 4Å: Chain A: M.1, N.2, M.3, S.52, L.53, L.56, L.59, M.62, R.63 Ligands: OLC.5 Ligand excluded by PLIP OLC.2: 9 residues within 4Å: Chain A: W.39, M.115, F.119, Q.120, L.133, I.134, T.137, F.138 Ligands: OLC.4 Ligand excluded by PLIP OLC.3: 4 residues within 4Å: Chain A: P.42, W.44, V.45 Ligands: OLC.5 Ligand excluded by PLIP OLC.4: 9 residues within 4Å: Chain A: W.39, M.105, W.108, L.109, T.137, T.140, G.141 Ligands: OLC.2, OLC.14 Ligand excluded by PLIP OLC.5: 8 residues within 4Å: Chain A: W.39, N.40, P.41, V.45, I.134, W.135 Ligands: OLC.1, OLC.3 Ligand excluded by PLIP OLC.6: 6 residues within 4Å: Chain A: L.12, C.15, A.19, T.51, Y.54 Ligands: OLC.10 Ligand excluded by PLIP OLC.7: 6 residues within 4Å: Chain B: W.108, M.115, W.116, F.119, Q.120, T.123 Ligand excluded by PLIP OLC.8: 5 residues within 4Å: Chain B: M.105, F.144, M.147, R.148, W.151 Ligand excluded by PLIP OLC.9: 2 residues within 4Å: Chain B: L.59, W.124 Ligand excluded by PLIP OLC.10: 10 residues within 4Å: Chain A: A.6, L.9, T.10, A.13 Chain B: Q.72, F.76, F.83, V.106, F.110 Ligands: OLC.6 Ligand excluded by PLIP OLC.11: 10 residues within 4Å: Chain C: M.1, N.2, M.3, S.52, L.53, L.56, L.59, M.62, R.63 Ligands: OLC.15 Ligand excluded by PLIP OLC.12: 9 residues within 4Å: Chain C: W.39, M.115, F.119, Q.120, L.133, I.134, T.137, F.138 Ligands: OLC.14 Ligand excluded by PLIP OLC.13: 4 residues within 4Å: Chain C: P.42, W.44, V.45 Ligands: OLC.15 Ligand excluded by PLIP OLC.14: 9 residues within 4Å: Chain C: W.39, M.105, W.108, L.109, T.137, T.140, G.141 Ligands: OLC.4, OLC.12 Ligand excluded by PLIP OLC.15: 8 residues within 4Å: Chain C: W.39, N.40, P.41, V.45, I.134, W.135 Ligands: OLC.11, OLC.13 Ligand excluded by PLIP OLC.16: 6 residues within 4Å: Chain C: L.12, C.15, A.19, T.51, Y.54 Ligands: OLC.20 Ligand excluded by PLIP OLC.17: 6 residues within 4Å: Chain D: W.108, M.115, W.116, F.119, Q.120, T.123 Ligand excluded by PLIP OLC.18: 5 residues within 4Å: Chain D: M.105, F.144, M.147, R.148, W.151 Ligand excluded by PLIP OLC.19: 2 residues within 4Å: Chain D: L.59, W.124 Ligand excluded by PLIP OLC.20: 10 residues within 4Å: Chain C: A.6, L.9, T.10, A.13 Chain D: Q.72, F.76, F.83, V.106, F.110 Ligands: OLC.16 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, J. et al., New TSPO Crystal Structures of Mutant and Heme-Bound Forms with Altered Flexibility, Ligand Binding, and Porphyrin Degradation Activity. Biochemistry (2023)

Release Date

2023-03-29

Peptides

Tryptophan-rich sensory protein: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Membrane

We predict this structure to be a membrane protein.
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Tryptophan-rich sensory protein

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