SMTL ID : 8eds.1

Escherichia coli pyruvate kinase (PykF) P70Q

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-tetramer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 9 residues within 4Å: Chain A: T.378, Q.379, G.380, G.381, K.382, S.383, S.459, G.460, T.461 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:T.378, A:Q.379, A:G.380, A:G.381, A:K.382, A:S.383, A:S.383, A:S.459, A:G.460, A:T.461 Water bridges: A:T.462, A:T.462 SO4.2: 9 residues within 4Å: Chain B: T.378, Q.379, G.380, G.381, K.382, S.383, S.459, G.460, T.461 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:T.378, B:Q.379, B:G.380, B:G.381, B:K.382, B:S.383, B:G.460 Water bridges: B:T.462 SO4.3: 9 residues within 4Å: Chain C: T.378, Q.379, G.380, G.381, K.382, S.383, S.459, G.460, T.461 12 PLIP interactions: 12 interactions with chain C Hydrogen bonds: C:T.378, C:Q.379, C:G.380, C:G.381, C:K.382, C:S.383, C:S.383, C:S.459, C:G.460, C:T.461 Water bridges: C:T.462, C:T.462 SO4.4: 9 residues within 4Å: Chain D: T.378, Q.379, G.380, G.381, K.382, S.383, S.459, G.460, T.461 8 PLIP interactions: 8 interactions with chain D Hydrogen bonds: D:T.378, D:Q.379, D:G.380, D:G.381, D:K.382, D:S.383, D:G.460 Water bridges: D:T.462

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Donovan, K.A. et al., Beneficial mutations occurring in E. coli pyruvate kinase afford new allosteric mechanisms leading to faster resumption of growth. To Be Published

Release Date

2022-11-16

Peptides

Pyruvate kinase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Pyruvate kinase