SMTL ID : 8ehn.1 (1 other biounit)

PRRSV-1 PLP2 domain

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.101, C.132, C.137, C.141 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.101, A:C.132, A:C.137, A:C.141

3 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 5 residues within 4Å: Chain A: R.154, E.157, F.177, P.181, P.182 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.154 ACT.3: 5 residues within 4Å: Chain A: Q.90, L.91, P.92, S.127, L.128 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.90, A:L.128 ACT.4: 3 residues within 4Å: Chain A: T.35, R.56, V.119 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.35 Salt bridges: A:R.56

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bailey-Elkin, B.A. et al., Demonstrating the importance of porcine reproductive and respiratory syndrome virus papain-like protease 2 deubiquitinating activity in viral replication by structure-guided mutagenesis. Plos Pathog. (2023)

Release Date

2023-12-06

Peptides

Papain-like protease 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Papain-like protease 2

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