SMTL ID : 8ejh.1

Lassa virus glycoprotein complex (Josiah) bound to 12.1F Fab

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-3-3-3-3-mer
Ligands
12 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
3 x NAG- NAG- BMA- MAN- MAN: alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
9 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
3 x NAG- NAG- BMA- MAN- MAN- MAN- MAN: alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
6 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
3 x MAN: alpha-D-mannopyranose(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Perrett, H.R. et al., Structural conservation of Lassa virus glycoproteins and recognition by neutralizing antibodies. Cell Rep (2023)
Release Date
2023-06-07
Peptides
Glycoprotein G1: ABD
Glycoprotein G2: CEF
12.1F Fab heavy chain: GIK
12.1F Fab light chain: HJL
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
C
B
B
D
A
C
c
E
b
F
a
G
H
I
J
K
h
H
L
J
K
L
l

Glycoprotein G1

Toggle Identical (ABD)

Glycoprotein G2

Toggle Identical (CEF)

12.1F Fab heavy chain

Toggle Identical (GIK)

12.1F Fab light chain

Toggle Identical (HJL)

Related Entries With Identical Sequence

5vk2.1 | 6p95.1 | 7tyv.1 | 8ejd.1 | 8eji.1 | 8tyc.1 | 8tye.1 | 8vcv.1 | 8ve8.1 | 9cj8.1