SMTL ID : 8ejx.1

Crystal structure of human cyclophilin D (CypD) with in complex with the covalently bound Ebselen inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

1 x 9JT: N-phenyl-2-selanylbenzamide(Non-covalent)

9JT.1: 9 residues within 4Å: Chain A: R.55, I.57, F.60, M.61, S.99, F.113, C.115, L.122, H.126 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.57, A:F.60, A:F.60, A:L.122 pi-Stacking: A:F.113, A:H.126

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Samanta, S. et al., New cyclophilin D inhibitor rescues mitochondrial and cognitive function in Alzheimer's disease. Brain (2023)

Release Date

2023-10-18

Peptides

Peptidyl-prolyl cis-trans isomerase F, mitochondrial: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidyl-prolyl cis-trans isomerase F, mitochondrial

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