SMTL ID : 8ems.1

Cryo-EM structure of human liver glycogen phosphorylase

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)

PLP.1: 13 residues within 4Å: Chain A: Y.91, G.136, R.139, W.492, K.569, K.575, Y.649, R.650, V.651, G.676, T.677, G.678, K.681 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:Y.91, A:R.139, A:V.651, A:K.681 Hydrogen bonds: A:T.677, A:G.678 Salt bridges: A:K.575 PLP.2: 13 residues within 4Å: Chain B: Y.91, G.136, R.139, W.492, K.569, K.575, Y.649, R.650, V.651, G.676, T.677, G.678, K.681 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:Y.91, B:R.139, B:V.651, B:K.681 Hydrogen bonds: B:T.677, B:G.678 Salt bridges: B:K.575

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Su, C.C. et al., High-resolution structural-omics of human liver enzymes. Cell Rep (2023)

Release Date

2023-05-10

Peptides

Glycogen phosphorylase, liver form: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Glycogen phosphorylase, liver form