SMTL ID : 8eq1.1

Escherichia coli pyruvate kinase D127N

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.32 Å

Oligo State

homo-tetramer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 9 residues within 4Å: Chain A: T.378, Q.379, G.380, G.381, K.382, S.383, S.459, G.460, T.462 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:T.378, A:T.378, A:Q.379, A:G.380, A:G.381, A:K.382, A:S.383, A:G.460 SO4.2: 8 residues within 4Å: Chain B: T.378, Q.379, G.380, G.381, K.382, S.383, S.459, G.460 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:T.378, B:Q.379, B:G.380, B:G.381, B:K.382, B:S.383, B:G.460 SO4.3: 10 residues within 4Å: Chain C: A.377, T.378, Q.379, G.380, G.381, K.382, S.383, S.459, G.460, T.461 8 PLIP interactions: 8 interactions with chain C Hydrogen bonds: C:T.378, C:T.378, C:Q.379, C:G.380, C:G.381, C:K.382, C:S.383, C:G.460 SO4.4: 9 residues within 4Å: Chain D: A.377, T.378, Q.379, G.380, G.381, K.382, S.383, S.459, G.460 7 PLIP interactions: 7 interactions with chain D Hydrogen bonds: D:T.378, D:T.378, D:Q.379, D:G.380, D:G.381, D:K.382, D:S.383

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Donovan, K.A. et al., Beneficial mutations occurring in E. coli pyruvate kinase afford new allosteric mechanisms leading to faster resumption of growth. To Be Published

Release Date

2023-01-18

Peptides

Pyruvate kinase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

C
B

D
D

Pyruvate kinase