SMTL ID : 8esc.1

Structure of the Yeast NuA4 Histone Acetyltransferase Complex

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-mer

Ligands

1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.1: 21 residues within 4Å: Chain B: G.22, S.23, Y.24, T.25, G.78, G.161, H.162, D.163, T.164, G.187, Q.240, K.243, E.244, G.412, G.413, T.414, S.416, I.417, Q.449 Ligands: MG.2, MG.3 14 PLIP interactions: 14 interactions with chain B Hydrogen bonds: B:S.23, B:Y.24, B:Y.24, B:T.25, B:H.162, B:H.162, B:D.163, B:T.164, B:Q.240, B:K.243, B:G.413, B:S.416, B:S.416, B:Q.449

2 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)

MG.2: 1 residues within 4Å: Ligands: ATP.1 No protein-ligand interaction detected (PLIP) MG.3: 4 residues within 4Å: Chain B: T.25, N.27, Q.449 Ligands: ATP.1 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:Q.449

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zukin, S.A. et al., Structure and flexibility of the yeast NuA4 histone acetyltransferase complex. Elife (2022)

Release Date

2022-11-16

Peptides

Transcription-associated protein 1: A
Actin-related protein 4: B
Actin: C
Enhancer of polycomb-like protein 1: D
Chromatin modification-related protein EAF1: E
SWR1-complex protein 4: F

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
Z

B
R

C
A

D
P

E
E

F
S

Transcription-associated protein 1

Actin-related protein 4

Actin

Enhancer of polycomb-like protein 1

Chromatin modification-related protein EAF1

SWR1-complex protein 4

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