SMTL ID : 8etx.1

Ancestral PETase 55_547

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

2 x NA: SODIUM ION(Non-functional Binders)

NA.1: 4 residues within 4Å: Chain A: R.53, A.56, F.59, G.60 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.53 Water bridges: A:G.58 NA.6: 4 residues within 4Å: Chain A: T.278, C.279, P.280, Y.281 1 PLIP interactions: 1 interactions with chain A Water bridges: A:P.280

1 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.2: 13 residues within 4Å: Chain A: G.83, Y.84, T.85, A.86, S.90, H.151, S.152, M.153, I.200, H.230, F.231, N.234 Ligands: SO4.4 3 PLIP interactions: 3 interactions with chain A Water bridges: A:G.83, A:S.152, A:S.152

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 3 residues within 4Å: Chain A: D.142, S.143, S.144 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.142, A:S.143 EDO.5: 5 residues within 4Å: Chain A: T.68, T.69, T.70, S.71, R.140 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.69, A:T.70, A:T.70, A:S.71, A:S.71

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 4 residues within 4Å: Chain A: Y.84, M.153, W.177 Ligands: PG4.2 No protein-ligand interaction detected (PLIP) SO4.7: 7 residues within 4Å: Chain A: N.197, D.198, T.199, I.200, S.229, H.230, F.231 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:D.198, A:T.199, A:T.199, A:I.200, A:H.230, A:F.231 Water bridges: A:N.197

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.8: 1 residues within 4Å: Chain A: R.276 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vongsouthi, V. et al., Ancestral reconstruction of polyethylene terephthalate degrading cutinases reveals a rugged and unexplored sequence-fitness landscape. Sci Adv (2025)

Release Date

2023-11-01

Peptides

Polyethylene terephthalate hydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Polyethylene terephthalate hydrolase