SMTL ID : 8ex4.1

Human S1P transporter Spns2 in an inward-facing open conformation (state 1)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x S1P: (2S,3R,4E)-2-amino-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate(Non-covalent)

S1P.1: 18 residues within 4Å: Chain A: Y.22, S.134, Y.137, F.138, I.140, P.141, S.144, T.231, L.234, G.235, T.272, G.276, F.277, V.280, E.335, L.338, F.339, W.342 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:Y.22, A:I.140, A:T.231, A:L.234, A:L.234, A:T.272, A:V.280, A:E.335, A:L.338, A:F.339, A:F.339, A:F.339, A:F.339 Hydrogen bonds: A:S.134, A:G.276

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, H. et al., Structural and functional insights into Spns2-mediated transport of sphingosine-1-phosphate. Cell (2023)

Release Date

2023-05-31

Peptides

Sphingosine-1-phosphate transporter SPNS2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Sphingosine-1-phosphate transporter SPNS2

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