SMTL ID : 8f0h.1

Structure of SARS-CoV-2 spike with antibody Fabs 2A10 and 1H2 (Local refinement of the RBD and Fabs 1H2 and 2A10)

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-mer
Ligands
1 x NAG- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Hastie, K.M. et al., Potent Omicron-neutralizing antibodies isolated from a patient vaccinated 6 months before Omicron emergence. Cell Rep (2023)
Release Date
2023-05-03
Peptides
Antibody Fab 1H2 heavy chain: A
Spike glycoprotein: B
Antibody Fab 1H2 light chain: C
Antibody Fab 2A10 heavy chain: D
Antibody Fab 2A10 light chain: E
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
B
B
C
C
D
D
H
E
L

Antibody Fab 1H2 heavy chain

Spike glycoprotein

Antibody Fab 1H2 light chain

Antibody Fab 2A10 heavy chain

Antibody Fab 2A10 light chain