SMTL ID : 8f1h.1

EGFR kinase in complex with TAS6417 (CLN-081)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

1 x X9H: N-[(5P,8S,10R)-4-amino-6-methyl-5-(quinolin-3-yl)-8,9-dihydropyrimido[5,4-b]indolizin-8-yl]prop-2-enamide(Covalent)

X9H.1: 19 residues within 4Å: Chain A: L.27, F.32, V.35, A.52, K.54, E.71, M.75, L.97, I.98, T.99, Q.100, L.101, M.102, G.105, C.106, D.109, R.150, L.153, T.163 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:F.32, A:F.32, A:V.35, A:K.54, A:K.54, A:L.97, A:T.99, A:R.150, A:L.153 Hydrogen bonds: A:Q.100, A:M.102

1 x CIT: CITRIC ACID(Non-functional Binders)

CIT.2: 6 residues within 4Å: Chain A: R.150, V.185, P.186, I.187, K.188, W.189 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:P.186, A:W.189 Hydrogen bonds: A:I.187, A:K.188 Water bridges: A:R.150 Salt bridges: A:R.150

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhao, H. et al., Biochemical analysis of EGFR exon20 insertion variants insASV and insSVD and their inhibitor sensitivity. Proc.Natl.Acad.Sci.USA (2024)

Release Date

2023-11-08

Peptides

Epidermal growth factor receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Epidermal growth factor receptor

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