SMTL ID : 8f1z.1

EGFR kinase in complex with Bayer #33

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x X9B: (2P)-3-(3-chloro-2-methoxyanilino)-2-[3-(2-methoxy-2-methylpropoxy)pyridin-4-yl]-1,5,6,7-tetrahydro-4H-pyrrolo[3,2-c]pyridin-4-one(Non-covalent)

X9B.1: 20 residues within 4Å: Chain A: L.27, G.28, F.32, V.35, A.52, I.53, K.54, E.71, M.75, L.86, L.97, T.99, Q.100, L.101, M.102, C.106, N.151, L.153, T.163, D.164 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:F.32, A:F.32, A:K.54, A:L.97, A:T.99, A:L.153 Hydrogen bonds: A:M.102, A:T.163, A:T.163, A:D.164, A:D.164, A:D.164

2 x CIT: CITRIC ACID(Non-functional Binders)

CIT.2: 8 residues within 4Å: Chain A: R.150, V.185, P.186, I.187, K.188, W.189, A.229 Ligands: CIT.3 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:I.187, A:K.188 Salt bridges: A:R.150 CIT.3: 5 residues within 4Å: Chain A: L.108, R.112, R.150, K.222 Ligands: CIT.2 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.108 Hydrogen bonds: A:R.112 Water bridges: A:R.112 Salt bridges: A:R.112, A:K.222, A:K.222

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhao, H. et al., Biochemical analysis of EGFR exon20 insertion variants insASV and insSVD and their inhibitor sensitivity. Proc.Natl.Acad.Sci.USA (2024)

Release Date

2023-11-08

Peptides

Epidermal growth factor receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Epidermal growth factor receptor

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