SMTL ID : 8f4r.1

Gentamicin bound aminoglycoside efflux pump AcrD

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
homo-trimer
Ligands
1 x LLL: (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDR OXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Zhang, Z. et al., Cryo-EM Structures of AcrD Illuminate a Mechanism for Capturing Aminoglycosides from Its Central Cavity. Mbio (2023)
Release Date
2022-12-28
Peptides
Efflux pump membrane transporter: ABC
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
Membrane
We predict this structure to be a membrane protein.

Efflux pump membrane transporter

Toggle Identical (BC)

Related Entries With Identical Sequence

8f3e.1 | 8f4n.1 | 8f56.1