SMTL ID : 8f5d.1

Architecture of the MurE-MurF ligase bacterial cell wall biosynthesis complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.56 Å

Oligo State

monomer

Ligands

9 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: H.369, G.399, R.402, K.406, N.427, R.429 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.399, A:N.427 Salt bridges: A:R.402, A:K.406, A:R.429 SO4.2: 5 residues within 4Å: Chain A: S.593, N.594, G.595, K.596, T.597 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.595, A:K.596, A:T.597, A:T.597, A:T.597 Salt bridges: A:K.596 SO4.3: 1 residues within 4Å: Chain A: R.739 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.739 SO4.4: 6 residues within 4Å: Chain A: T.118, G.119, T.120, K.123, S.189, S.190 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.119, A:S.190 Salt bridges: A:K.123 SO4.5: 2 residues within 4Å: Chain A: L.767, H.768 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.767, A:H.768 Salt bridges: A:H.768 SO4.6: 5 residues within 4Å: Chain A: R.34, E.39, E.41, R.171, R.175 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.39 Salt bridges: A:R.34, A:R.171, A:R.175 SO4.7: 2 residues within 4Å: Chain A: R.402, Y.483 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.402, A:Y.483 SO4.8: 1 residues within 4Å: Chain A: S.256 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.256, A:S.256 SO4.9: 4 residues within 4Å: Chain A: R.739, C.749, G.750, G.759 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.739

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shirakawa, K.T. et al., Architecture and genomic arrangement of the MurE-MurF bacterial cell wall biosynthesis complex. Proc.Natl.Acad.Sci.USA (2023)

Release Date

2023-06-07

Peptides

Multifunctional fusion protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Multifunctional fusion protein