SMTL ID : 8f6x.1

cryo-EM structure of a structurally designed Human metapneumovirus F protein in complex with antibody MPE8

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-3-3-mer

Ligands

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 5 residues within 4Å: Chain A: F.150, N.154, K.170, M.171, S.174 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.174 NAG.2: 3 residues within 4Å: Chain B: F.150, N.154, S.174 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:F.150 NAG.3: 6 residues within 4Å: Chain B: P.64 Chain C: F.150, K.153, N.154, K.170, S.174 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:K.153, C:S.174

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ou, L. et al., cryo-EM structure of a structurally designed Human metapneumovirus F protein in complex with antibody MPE8. To Be Published

Release Date

2023-08-02

Peptides

Structurally designed HMPV F protein HMPV_v3B_D12_DS454,Fibritin: ABC
MPE8 Single chain variable fragment: DEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

Structurally designed HMPV F protein HMPV_v3B_D12_DS454,Fibritin

MPE8 Single chain variable fragment