SMTL ID : 8fds.1

Ankyrin domain of SKD3 isoform 2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

3 x FMT: FORMIC ACID(Non-functional Binders)

FMT.1: 5 residues within 4Å: Chain A: D.131, H.178, H.179, H.181, H.182 No protein-ligand interaction detected (PLIP) FMT.2: 3 residues within 4Å: Chain A: N.135, L.137, Q.138 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.135 Water bridges: A:R.139 FMT.3: 3 residues within 4Å: Chain A: P.5, H.38, R.39 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.39

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, S. et al., Structural basis of impaired disaggregase function in the oxidation-sensitive SKD3 mutant causing 3-methylglutaconic aciduria. Nat Commun (2023)

Release Date

2023-04-19

Peptides

Caseinolytic peptidase B protein homolog: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Caseinolytic peptidase B protein homolog