- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-tetramer
- Ligands
- 8 x ERG: ERGOSTEROL(Non-covalent)
- 1 x R2R: ruthenium(6+) azanide pentaamino(oxido)ruthenium (1/4/2)(Non-covalent)
R2R.3: 12 residues within 4Å:- Chain A: T.539, N.572, I.575
- Chain B: T.539, N.572, I.575
- Chain C: T.539, N.572, I.575
- Chain D: T.539, N.572, I.575
14 PLIP interactions:3 interactions with chain D, 3 interactions with chain A, 4 interactions with chain C, 4 interactions with chain B- Hydrogen bonds: D:T.539, D:T.539, D:T.539, A:T.539, A:T.539, A:T.539, C:T.539, C:T.539, C:T.539, C:N.572, B:T.539, B:T.539, B:T.539, B:T.539
- 4 x CPL: 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE(Non-covalent)
CPL.4: 9 residues within 4Å:- Chain A: I.337, I.341, T.345, I.348, Y.349
- Chain B: L.502, D.525, Y.526, P.527
8 PLIP interactions:4 interactions with chain A, 4 interactions with chain B- Hydrophobic interactions: A:I.337, A:I.341, A:I.348, B:L.502, B:L.502, B:Y.526
- pi-Cation interactions: A:Y.349
- Hydrogen bonds: B:Y.526
CPL.7: 9 residues within 4Å:- Chain B: I.337, I.341, T.345, I.348, Y.349
- Chain C: L.502, D.525, Y.526, P.527
8 PLIP interactions:4 interactions with chain C, 4 interactions with chain B- Hydrophobic interactions: C:L.502, C:L.502, C:Y.526, B:I.337, B:I.341, B:I.348
- Hydrogen bonds: C:Y.526
- pi-Cation interactions: B:Y.349
CPL.10: 9 residues within 4Å:- Chain C: I.337, I.341, T.345, I.348, Y.349
- Chain D: L.502, D.525, Y.526, P.527
8 PLIP interactions:4 interactions with chain C, 4 interactions with chain D- Hydrophobic interactions: C:I.337, C:I.341, C:I.348, D:L.502, D:L.502, D:Y.526
- pi-Cation interactions: C:Y.349
- Hydrogen bonds: D:Y.526
CPL.11: 9 residues within 4Å:- Chain A: L.502, D.525, Y.526, P.527
- Chain D: I.337, I.341, T.345, I.348, Y.349
8 PLIP interactions:4 interactions with chain A, 4 interactions with chain D- Hydrophobic interactions: A:L.502, A:L.502, A:Y.526, D:I.337, D:I.341, D:I.348
- Hydrogen bonds: A:Y.526
- pi-Cation interactions: D:Y.349
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pumroy, R.A. et al., Molecular details of ruthenium red pore block in TRPV channels. Embo Rep. (2024)
- Release Date
- 2024-02-07
- Peptides
- Transient receptor potential cation channel subfamily V member 5: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-tetramer
- Ligands
- 8 x ERG: ERGOSTEROL(Non-covalent)
- 1 x R2R: ruthenium(6+) azanide pentaamino(oxido)ruthenium (1/4/2)(Non-covalent)
- 4 x CPL: 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pumroy, R.A. et al., Molecular details of ruthenium red pore block in TRPV channels. Embo Rep. (2024)
- Release Date
- 2024-02-07
- Peptides
- Transient receptor potential cation channel subfamily V member 5: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D - Membrane
-
We predict this structure to be a membrane protein.