SMTL ID : 8fii.2 (1 other biounit)

Wild type APOBEC3A in complex with TT(FdZ)-hairpin inhibitor (crystal form 1)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.94 Å

Oligo State

monomer

Ligands

4 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 1 residues within 4Å: Ligands: PO4.2 No protein-ligand interaction detected (PLIP) PO4.2: 1 residues within 4Å: Ligands: PO4.1 No protein-ligand interaction detected (PLIP) PO4.3: 2 residues within 4Å: Chain A: R.191 Ligands: PO4.4 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.191 PO4.4: 3 residues within 4Å: Chain A: R.191, Q.195 Ligands: PO4.3 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.191

1 x ZN: ZINC ION(Non-covalent)

ZN.5: 5 residues within 4Å: Chain A: H.70, E.72, C.101, C.106 Chain B: N.7 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.70, A:E.72, A:C.101, A:C.106

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Harjes, S. et al., Structure-guided inhibition of the cancer DNA-mutating enzyme APOBEC3A. Nat Commun (2023)

Release Date

2023-09-06

Peptides

DNA dC->dU-editing enzyme APOBEC-3A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

DNA dC->dU-editing enzyme APOBEC-3A

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