SMTL ID : 8frj.1

Structure of nsp14 N7-MethylTransferase domain fused with TELSAM bound to SGC0946

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.57 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.234, T.257, C.259, C.266, H.269 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.234, A:C.259, A:C.266, A:H.269

1 x AW2: 5-bromo-7-{5-[(3-{[(4-tert-butylphenyl)carbamoyl]amino}propyl)(propan-2-yl)amino]-5-deoxy-beta-D-ribofuranosyl}-7H-pyrrolo[2,3-d]pyrimidin-4-amine(Non-covalent)

AW2.2: 18 residues within 4Å: Chain A: I.87, I.114, G.115, P.117, D.134, A.135, Q.136, L.148, F.149, Y.150, W.167, N.168, C.169, N.170, V.171, F.183, A.286, F.288 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:I.87, A:P.117, A:F.183, A:F.288 Hydrogen bonds: A:D.134, A:A.135, A:Q.136, A:Y.150, A:Y.150 Water bridges: A:Q.136, A:N.170, A:N.170, A:N.170 pi-Stacking: A:F.183 Halogen bonds: A:N.170

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kottur, J. et al., Structures of SARS-CoV-2 N7-methyltransferase with DOT1L and PRMT7 inhibitors provide a platform for new antivirals. Plos Pathog. (2023)

Release Date

2023-07-26

Peptides

Transcription factor ETV6,Guanine-N7 methyltransferase nsp14 chimera: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Transcription factor ETV6,Guanine-N7 methyltransferase nsp14 chimera

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