SMTL ID : 8fuy.1

Glucose-6-phosphate 1-dehydrogenase (G6PDH) from Crithidia fasciculata (citrate bound)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.45 Å

Oligo State

homo-dimer

Ligands

4 x CIT: CITRIC ACID(Non-functional Binders)

CIT.1: 9 residues within 4Å: Chain A: H.249, Y.250, F.285, E.287, D.306, V.307, H.311, K.405, Y.483 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:D.306, A:Y.483 Salt bridges: A:H.249, A:H.249, A:H.311, A:K.405 CIT.2: 8 residues within 4Å: Chain A: Q.282, T.284, K.286, K.402, Y.411, R.415, R.533, F.549 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:T.284, A:T.284, A:K.286, A:Y.411 Salt bridges: A:K.286, A:K.402, A:R.415, A:R.533, A:R.533 CIT.4: 6 residues within 4Å: Chain B: H.249, F.285, E.287, D.306, H.311, K.405 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:E.287 Salt bridges: B:H.249, B:H.249, B:H.311, B:K.405 CIT.5: 7 residues within 4Å: Chain B: Q.282, T.284, K.286, K.402, Y.411, R.415, R.533 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:Q.282, B:K.286, B:Y.411 Salt bridges: B:K.286, B:K.286, B:K.402, B:R.415, B:R.415, B:R.533, B:R.533

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 3 residues within 4Å: Chain A: R.415, Y.445, K.447 Ligand excluded by PLIP CL.6: 3 residues within 4Å: Chain B: R.415, Y.445, K.447 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, L. et al., Glucose-6-phosphate 1-dehydrogenase (G6PDH) from Crithidia fasciculata (citrate bound). To be published

Release Date

2023-02-08

Peptides

Glucose-6-phosphate 1-dehydrogenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Glucose-6-phosphate 1-dehydrogenase