SMTL ID : 8g7a.1

SARS-CoV-2 spike/Nb3 complex with 2 RBDs up and 3 Nb3 (local refinement)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-3-3-mer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)(Post Translational Modification)

NAG.1: 2 residues within 4Å: Chain C: N.318, Q.567 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:N.318, C:Q.567 NAG.2: 3 residues within 4Å: Chain E: N.318, T.320, Q.567 1 PLIP interactions: 1 interactions with chain E Hydrogen bonds: E:Q.567

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ye, G. et al., SARS-CoV-2 spike/Nb3 complex with 2 RBDs up and 3 Nb3 (local refinement). To Be Published

Release Date

2024-02-21

Peptides

Nanosota-3: ADF
Spike glycoprotein: BCE

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

D
C

F
F

B
A

C
B

E
D

Nanosota-3

Spike glycoprotein

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