SMTL ID : 8g7o.1

ATP- and mtHsp10-bound mtHsp60 V72I focus

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-7-7-mer

Ligands

7 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.1: 20 residues within 4Å: Chain A: T.29, G.31, P.32, K.50, D.51, D.86, G.87, T.88, T.89, T.90, I.149, D.398, G.414, G.415, I.454, Y.478, D.479, A.480, M.481, D.495 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:G.31, A:D.86, A:G.87, A:T.89, A:T.90, A:T.90, A:D.398, A:G.415, A:D.479, A:D.479, A:A.480, A:M.481, A:D.495 Salt bridges: A:K.50 ATP.2: 22 residues within 4Å: Chain B: T.29, G.31, P.32, K.50, D.51, G.52, D.86, G.87, T.88, T.89, T.90, I.149, D.398, G.414, G.415, I.454, Y.478, D.479, A.480, M.481, I.493, D.495 15 PLIP interactions: 15 interactions with chain B Hydrogen bonds: B:G.31, B:G.52, B:D.86, B:G.87, B:T.88, B:T.89, B:T.89, B:T.90, B:T.90, B:D.398, B:G.415, B:D.479, B:A.480, B:D.495 Salt bridges: B:K.50 ATP.3: 20 residues within 4Å: Chain C: T.29, M.30, G.31, P.32, K.50, D.51, D.86, G.87, T.88, T.89, T.90, I.149, D.398, G.414, G.415, I.454, Y.478, D.479, A.480, D.495 14 PLIP interactions: 14 interactions with chain C Hydrogen bonds: C:G.31, C:D.86, C:G.87, C:T.88, C:T.89, C:T.90, C:T.90, C:D.398, C:D.398, C:G.415, C:D.479, C:A.480, C:D.495 Salt bridges: C:K.50 ATP.4: 21 residues within 4Å: Chain D: T.29, M.30, G.31, P.32, K.50, D.51, G.52, D.86, G.87, T.88, T.89, T.90, I.149, D.398, G.414, G.415, I.454, Y.478, D.479, A.480, D.495 17 PLIP interactions: 17 interactions with chain D Hydrogen bonds: D:G.31, D:D.51, D:D.51, D:G.52, D:D.86, D:G.87, D:T.88, D:T.89, D:T.89, D:T.90, D:T.90, D:D.398, D:G.415, D:D.479, D:A.480, D:D.495 Salt bridges: D:K.50 ATP.5: 21 residues within 4Å: Chain E: T.29, G.31, P.32, K.50, D.51, G.52, D.86, G.87, T.88, T.89, T.90, I.149, D.398, G.414, G.415, I.454, Y.478, D.479, A.480, M.481, D.495 15 PLIP interactions: 15 interactions with chain E Hydrogen bonds: E:G.31, E:G.52, E:D.86, E:G.87, E:T.88, E:T.89, E:T.89, E:T.90, E:D.398, E:D.398, E:G.415, E:D.479, E:A.480, E:D.495 Salt bridges: E:K.50 ATP.6: 21 residues within 4Å: Chain F: T.29, M.30, G.31, P.32, D.51, G.52, D.86, G.87, T.88, T.89, T.90, I.149, D.398, G.414, G.415, I.454, Y.478, D.479, A.480, M.481, D.495 16 PLIP interactions: 16 interactions with chain F Hydrogen bonds: F:G.31, F:G.52, F:D.86, F:D.86, F:G.87, F:T.88, F:T.89, F:T.90, F:D.398, F:G.415, F:D.479, F:D.479, F:A.480, F:M.481, F:D.495 Salt bridges: F:K.50 ATP.7: 19 residues within 4Å: Chain G: T.29, M.30, G.31, P.32, K.50, D.51, D.86, G.87, T.88, T.89, T.90, I.149, G.414, G.415, I.454, Y.478, D.479, A.480, D.495 17 PLIP interactions: 17 interactions with chain G Hydrogen bonds: G:G.31, G:D.51, G:G.52, G:D.86, G:D.86, G:G.87, G:T.88, G:T.89, G:T.89, G:T.90, G:D.398, G:G.415, G:D.479, G:D.479, G:A.480, G:D.495 Salt bridges: G:K.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Braxton, J.R. et al., Asymmetric apical domain states of mitochondrial Hsp60 coordinate substrate engagement and chaperonin assembly. Biorxiv (2023)

Release Date

2023-07-12

Peptides

60 kDa heat shock protein, mitochondrial: ABCDEFG
10 kDa heat shock protein, mitochondrial: HIJKLMN

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
I

J
J

K
K

L
L

M
M

N
N

60 kDa heat shock protein, mitochondrial

10 kDa heat shock protein, mitochondrial

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