SMTL ID : 8gad.1

Crystal structure of a high affinity PD-L1 binder

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.88 Å

Oligo State

homo-dimer

Ligands

1 x IND: INDOLE(Non-covalent)

IND.1: 7 residues within 4Å: Chain A: I.46, I.49, R.50 Chain B: I.46, N.87, F.89, I.90 8 PLIP interactions: 3 interactions with chain A, 5 interactions with chain B Hydrophobic interactions: A:I.46, A:I.49, B:I.46, B:F.89, B:I.90 Hydrogen bonds: A:R.50, B:N.87, B:N.87

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, W. et al., Design of High Affinity Binders to Convex Protein Target Sites. Biorxiv (2024)

Release Date

2024-08-21

Peptides

PD-L1 binder: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

PD-L1 binder