SMTL ID : 8gae.1

Hsp90 provides platform for CRaf dephosphorylation by PP5

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 3.30 Å

Oligo State

hetero-2-1-1-1-mer

Ligands

2 x K: POTASSIUM ION(Non-covalent)

K.1: 6 residues within 4Å: Chain A: N.104, T.107, K.110, G.133, Y.137 Ligands: ADP.3 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:N.104, A:T.107, A:G.133 K.4: 7 residues within 4Å: Chain B: N.104, L.105, T.107, K.110, G.133, Y.137 Ligands: ATP.6 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:N.104, B:G.133

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: N.49, G.130, G.135 Ligands: ADP.3 No protein-ligand interaction detected (PLIP) MG.5: 3 residues within 4Å: Chain B: N.49, G.135 Ligands: ATP.6 No protein-ligand interaction detected (PLIP)

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.3: 24 residues within 4Å: Chain A: N.49, A.50, A.53, K.56, D.91, I.94, G.95, M.96, N.104, L.105, K.110, S.111, G.112, T.113, G.130, Q.131, F.132, G.133, V.134, G.135, F.136, T.182 Ligands: K.1, MG.2 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:N.49, A:K.56, A:G.95, A:S.111, A:G.112, A:T.113, A:T.113, A:Q.131, A:G.133, A:G.135, A:F.136, A:T.182

1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.6: 27 residues within 4Å: Chain B: E.45, N.49, A.50, A.53, K.56, D.91, I.94, G.95, M.96, N.104, L.105, K.110, S.111, G.112, T.113, I.129, G.130, Q.131, F.132, G.133, V.134, G.135, F.136, T.182, R.395 Ligands: K.4, MG.5 12 PLIP interactions: 12 interactions with chain B Hydrogen bonds: B:E.45, B:N.49, B:G.112, B:T.113, B:Q.131, B:F.132, B:G.133, B:V.134, B:G.135, B:F.136, B:T.182 Salt bridges: B:R.395

2 x MN: MANGANESE (II) ION(Non-covalent)

MN.7: 6 residues within 4Å: Chain E: D.246, H.248, D.275, F.450, Y.455 Ligands: MN.8 3 PLIP interactions: 3 interactions with chain E Metal complexes: E:D.246, E:H.248, E:D.275 MN.8: 7 residues within 4Å: Chain E: D.246, D.275, N.307, A.308, H.356, H.431 Ligands: MN.7 3 PLIP interactions: 3 interactions with chain E Metal complexes: E:D.275, E:D.275, E:H.356

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jaime-Garza, M. et al., Hsp90 provides a platform for kinase dephosphorylation by PP5. Nat Commun (2023)

Release Date

2023-04-26

Peptides

Heat shock protein HSP 90-beta: AB
Hsp90 co-chaperone Cdc37: C
RAF proto-oncogene serine/threonine-protein kinase: D
Serine/threonine-protein phosphatase 5: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

Heat shock protein HSP 90-beta

Hsp90 co-chaperone Cdc37

RAF proto-oncogene serine/threonine-protein kinase

Serine/threonine-protein phosphatase 5

Related Entries With Identical Sequence