SMTL ID : 8gc7.1

Bruton's tyrosine kinase in complex with 5-(piperidin-1-yl)-3-{[4-(piperidin-4-yl)phenyl]amino}pyrazine-2-carboxamide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x YXJ: 5-(piperidin-1-yl)-3-[4-(piperidin-4-yl)anilino]pyrazine-2-carboxamide(Non-covalent)

YXJ.1: 16 residues within 4Å: Chain A: L.20, G.21, T.22, G.23, V.28, A.40, K.42, T.86, E.87, Y.88, M.89, A.90, N.91, G.92, C.93, L.140 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.20, A:L.20, A:Y.88 Hydrogen bonds: A:K.42, A:T.86, A:E.87, A:M.89, A:M.89

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 1 residues within 4Å: Chain A: G.47 No protein-ligand interaction detected (PLIP) EDO.3: 5 residues within 4Å: Chain A: M.61, V.70, L.72, S.150, D.151 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:V.70, A:D.151, A:D.151 Water bridges: A:K.42

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Montoya, S. et al., Kinase-impaired BTK mutations are susceptible to clinical-stage BTK and IKZF1/3 degrader NX-2127. Science (2024)

Release Date

2024-01-31

Peptides

Tyrosine-protein kinase BTK: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein kinase BTK

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