SMTL ID : 8gja.3 (2 other biounits)

RAD51C-XRCC3 structure

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-mer

Ligands

2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 24 residues within 4Å: Chain A: A.35, P.36, G.37, V.38, G.39, K.40, T.41, Q.42, R.77, D.80, R.234, I.253, T.254, T.255 Chain B: R.92, L.320, F.321, A.322, P.323, H.324, L.325, P.326, N.327 Ligands: BEF.2 16 PLIP interactions: 11 interactions with chain A, 5 interactions with chain B Hydrogen bonds: A:G.37, A:V.38, A:G.39, A:K.40, A:T.41, A:T.41, A:Q.42, A:Q.42, A:R.234, A:R.234, B:R.92, B:A.322, B:H.324, B:N.327, B:N.327 Salt bridges: A:K.40 ADP.3: 15 residues within 4Å: Chain B: E.106, S.107, A.108, S.109, G.110, K.111, T.112, Q.113, R.148, R.290, K.300, R.315, V.334, D.335, Q.336 13 PLIP interactions: 13 interactions with chain B Hydrogen bonds: B:A.108, B:S.109, B:G.110, B:K.111, B:T.112, B:T.112, B:Q.113, B:Q.113, B:R.290, B:K.300, B:R.315, B:Q.336 Salt bridges: B:K.111

1 x BEF: BERYLLIUM TRIFLUORIDE ION(Non-covalent)

BEF.2: 5 residues within 4Å: Chain A: T.41, E.70, S.72, D.151 Ligands: ADP.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Longo, M.A. et al., RAD51C-XRCC3 structure and cancer patient mutations define DNA replication roles. Nat Commun (2023)

Release Date

2023-08-16

Peptides

RAD51C: A
XRCC3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

RAD51C

XRCC3

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