- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.68 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x BTI: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL(Covalent)(Non-covalent)
- 1 x COA: COENZYME A(Non-covalent)
COA.2: 24 residues within 4Å:- Chain A: R.367, R.417, E.418, R.420, R.422, S.462, L.463, D.464, R.465, G.466, I.1020, G.1023, K.1024, R.1025, M.1048, N.1049, R.1053
- Chain D: R.44, Y.45, K.46, A.47, D.48, E.49, S.50
13 PLIP interactions:11 interactions with chain A, 2 interactions with chain D- Hydrogen bonds: A:R.420, A:L.463, A:D.464, A:R.465, A:N.1049, D:K.46, D:A.47
- Salt bridges: A:R.367, A:R.420, A:R.422, A:R.422, A:R.465, A:R.1053
- 4 x MN: MANGANESE (II) ION(Non-covalent)
MN.3: 3 residues within 4Å:- Chain A: D.542, H.741, H.743
2 PLIP interactions:2 interactions with chain A- Metal complexes: A:D.542, A:H.741
MN.6: 4 residues within 4Å:- Chain B: D.542, K.712, H.741, H.743
3 PLIP interactions:3 interactions with chain B- Metal complexes: B:D.542, B:H.741, B:H.743
MN.7: 4 residues within 4Å:- Chain C: D.542, K.712, H.741, H.743
2 PLIP interactions:2 interactions with chain C- Metal complexes: C:D.542, C:H.741
MN.10: 4 residues within 4Å:- Chain D: D.542, K.712, H.741, H.743
No protein-ligand interaction detected (PLIP)- 1 x ACO: ACETYL COENZYME *A(Covalent)
ACO.9: 22 residues within 4Å:- Chain A: F.20, A.21, R.44, Y.45, K.46, A.47, D.48, E.49, S.50
- Chain D: R.367, E.418, R.420, R.422, S.462, L.463, D.464, R.465, G.466, K.1024, R.1025, N.1049, R.1053
16 PLIP interactions:12 interactions with chain D, 4 interactions with chain A- Hydrogen bonds: D:R.420, D:S.462, D:D.464, D:R.465, D:G.466, D:K.1024, D:N.1049, A:K.46, A:A.47, A:S.50
- Salt bridges: D:R.367, D:R.422, D:R.422, D:R.465, D:R.1053
- Hydrophobic interactions: A:F.20
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Laseke, A.J. et al., Allosteric Site at the Biotin Carboxylase Dimer Interface Mediates Activation and Inhibition in Staphylococcus aureus Pyruvate Carboxylase. Biochemistry (2023)
- Release Date
- 2023-08-30
- Peptides
- Pyruvate carboxylase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
BC
DD
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.68 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x BTI: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL(Covalent)(Non-covalent)
- 1 x COA: COENZYME A(Non-covalent)
- 4 x MN: MANGANESE (II) ION(Non-covalent)
- 1 x ACO: ACETYL COENZYME *A(Covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Laseke, A.J. et al., Allosteric Site at the Biotin Carboxylase Dimer Interface Mediates Activation and Inhibition in Staphylococcus aureus Pyruvate Carboxylase. Biochemistry (2023)
- Release Date
- 2023-08-30
- Peptides
- Pyruvate carboxylase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
BC
DD
A