SMTL ID : 8gmb.1

Crystal structure of the full-length Bruton's tyrosine kinase (PH-TH domain not visible)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.40 Å

Oligo State

homo-dimer

Ligands

2 x 9AJ: 2-[3'-(hydroxymethyl)-1-methyl-5-({5-[(2S)-2-methyl-4-(oxetan-3-yl)piperazin-1-yl]pyridin-2-yl}amino)-6-oxo[1,6-dihydro[3,4'-bipyridine]]-2'-yl]-7,7-dimethyl-3,4,7,8-tetrahydro-2H-cyclopenta[4,5]pyrrolo[1,2-a]pyrazin-1(6H)-one(Non-covalent)

9AJ.1: 25 residues within 4Å: Chain A: L.408, G.409, T.410, G.411, Q.412, F.413, V.416, A.428, R.430, V.458, T.474, E.475, Y.476, M.477, A.478, N.479, G.480, D.521, N.526, L.528, D.539, M.542, T.543, V.546, Y.551 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:Q.412, A:V.416, A:V.416, A:Y.551 Hydrogen bonds: A:M.477, A:M.477, A:G.480 9AJ.2: 25 residues within 4Å: Chain B: L.408, G.409, T.410, G.411, Q.412, F.413, V.416, A.428, R.430, V.458, T.474, E.475, Y.476, M.477, A.478, N.479, G.480, D.521, N.526, L.528, D.539, M.542, T.543, V.546, Y.551 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:Q.412, B:V.416, B:V.416, B:Y.551 Hydrogen bonds: B:M.477, B:M.477, B:G.480

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lin, D.Y. et al., Conformational heterogeneity of the BTK PHTH domain drives multiple regulatory states. Elife (2024)

Release Date

2023-08-16

Peptides

Tyrosine-protein kinase BTK: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Tyrosine-protein kinase BTK