SMTL ID : 8gmc.2 (1 other biounit)

CRYSTAL STRUCTURE OF AP2 ASSOCIATED KINASE 1 COMPLEXED WITH 5-[(4-aminopiperidin-1-yl)methyl]-N-{3-[5-(propan-2-yl)-1,3,4-thiadiazol-2-yl]phenyl}pyrrolo[2,1-f][1,2,4]triazin-4-amine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x YFV: 5-[(4-aminopiperidin-1-yl)methyl]-N-{3-[5-(propan-2-yl)-1,3,4-thiadiazol-2-yl]phenyl}pyrrolo[2,1-f][1,2,4]triazin-4-amine(Non-covalent)

YFV.1: 18 residues within 4Å: Chain A: L.40, A.41, E.42, G.43, A.46, V.48, A.60, K.62, M.114, D.115, F.116, C.117, Q.121, E.168, N.169, L.171, C.181, D.182 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.40, A:A.46, A:V.48, A:L.171, A:D.182 Hydrogen bonds: A:C.117, A:N.169 Water bridges: A:Q.121

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: E.252, S.253, Q.254, V.255 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.254, A:Q.254, A:V.255

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dzierba, C.D. et al., Discovery of pyrrolo[2,1- f ][1,2,4]triazine-based inhibitors of adaptor protein 2-associated kinase 1 for the treatment of pain. Med.Chem.Res. (2023)

Release Date

2023-07-12

Peptides

AP2-associated protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

AP2-associated protein kinase 1

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